RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 SH3BP5LQ7L8J4 393 aa10.72□□□□□ -0.69
SMKR1-202ENST00000488846 METTL16Q86W50 562 aaKnown RBP10.72□□□□□ -0.69
SMKR1-202ENST00000488846 C2orf69Q8N8R5 385 aa10.72□□□□□ -0.69
SMKR1-202ENST00000488846 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
SMKR1-202ENST00000488846 NOL10Q9BSC4 688 aaKnown RBP10.72□□□□□ -0.69
SMKR1-202ENST00000488846 MKRN1Q9UHC7 482 aaKnown RBP10.72□□□□□ -0.69
SMKR1-202ENST00000488846 MAGEB6P1A0A0J9YX57 407 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
SMKR1-202ENST00000488846 USP2O75604 605 aaPredicted RBP10.71□□□□□ -0.69
SMKR1-202ENST00000488846 FLT1P17948 1338 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 HTRA3P83110 453 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
SMKR1-202ENST00000488846 SLFNL1Q499Z3 407 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.69
SMKR1-202ENST00000488846 TEX11Q8IYF3 940 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 APPBP2Q92624 585 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 HOOK2Q96ED9 719 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 PUS7LQ9H0K6 701 aaKnown RBP10.71□□□□□ -0.69
SMKR1-202ENST00000488846 OSBPL5Q9H0X9 879 aaPredicted RBP10.71□□□□□ -0.69
SMKR1-202ENST00000488846 ZNF408Q9H9D4 720 aa10.71□□□□□ -0.69
SMKR1-202ENST00000488846 DDTLA6NHG4 134 aaPredicted RBP10.7□□□□□ -0.7
SMKR1-202ENST00000488846 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
SMKR1-202ENST00000488846 TBC1D12O60347 775 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 HUNKP57058 714 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 TCP10Q12799 353 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 DEFB115Q30KQ5 88 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 MOB2Q70IA6 237 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 ARMC9Q7Z3E5 817 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMKR1-202ENST00000488846 TGFBRAP1Q8WUH2 860 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 OSBP2Q969R2 916 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 KLRG1Q96E93 195 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 CCDC136Q96JN2 1154 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 DHX36Q9H2U1 1008 aaKnown RBP10.7□□□□□ -0.7
SMKR1-202ENST00000488846 PPP4R2Q9NY27 417 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
SMKR1-202ENST00000488846 THSD7BQ9C0I4 1608 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 MBD4O95243 580 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
SMKR1-202ENST00000488846 PICALMQ13492 652 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 TTC22Q5TAA0 569 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 LCORLQ8N3X6 602 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 STRBPQ96SI9 672 aaKnown RBP10.69□□□□□ -0.7
SMKR1-202ENST00000488846 FSD1Q9BTV5 496 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 CRNKL1Q9BZJ0 848 aaKnown RBP10.69□□□□□ -0.7
SMKR1-202ENST00000488846 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 ABT1Q9ULW3 272 aaKnown RBP10.69□□□□□ -0.7
SMKR1-202ENST00000488846 SIPA1L1O43166 1804 aa10.69□□□□□ -0.7
SMKR1-202ENST00000488846 PHF20L1A8MW92 1017 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 FAM155AB1AL88 458 aaPredicted RBP10.68□□□□□ -0.7
SMKR1-202ENST00000488846 UBE2Q2LH0YL09 131 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 IREB2P48200 963 aaKnown RBP10.68□□□□□ -0.7
SMKR1-202ENST00000488846 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 RGMBQ6NW40 437 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.68□□□□□ -0.7
SMKR1-202ENST00000488846 ANKRD13AQ8IZ07 590 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
SMKR1-202ENST00000488846 ATP8A2Q9NTI2 1148 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 PI4KBQ9UBF8 816 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 ANGEL1Q9UNK9 670 aaKnown RBP10.68□□□□□ -0.7
SMKR1-202ENST00000488846 FZD1Q9UP38 647 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 OTOFQ9HC10 1997 aa10.68□□□□□ -0.7
SMKR1-202ENST00000488846 LAMB1P07942 1786 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 WDR33Q9C0J8 1336 aaKnown RBP10.67□□□□□ -0.7
SMKR1-202ENST00000488846 SLC10A3P09131 477 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 ECE1P42892 770 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 VEGFBP49765 207 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 GIMAP6Q6P9H5 292 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 CCDC102AQ96A19 550 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 SEC62Q99442 399 aaKnown RBP10.67□□□□□ -0.7
SMKR1-202ENST00000488846 ZNF341Q9BYN7 854 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 EHD4Q9H223 541 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 HELLSQ9NRZ9 838 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
SMKR1-202ENST00000488846 HERC5Q9UII4 1024 aaKnown RBP10.67□□□□□ -0.7
SMKR1-202ENST00000488846 MYH1P12882 1939 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 GSG1L2A8MUP6 293 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 TRIM6-TRIM34B2RNG4 842 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 M0R2C6 588 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 GPAA1O43292 621 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 PRKAB2O43741 272 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 GNAT2P19087 354 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 SDSP20132 328 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 MAP2K2P36507 400 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 USP5P45974 858 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 MAP3K9P80192 1104 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 GABPAQ06546 454 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 TTLL12Q14166 644 aaPredicted RBP10.66□□□□□ -0.7
SMKR1-202ENST00000488846 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
SMKR1-202ENST00000488846 CYP4F22Q6NT55 531 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 RASAL3Q86YV0 1011 aa10.66□□□□□ -0.7
SMKR1-202ENST00000488846 FOXP4Q8IVH2 680 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms