RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 CDC42EP5Q6NZY7 148 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
SFXN5-219ENST00000488839 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 TMEM39BQ9GZU3 492 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
SFXN5-219ENST00000488839 SNPHO15079 494 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 HMMRO75330 724 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 ENTPD3O75355 529 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.18■□□□□ 0.02
SFXN5-219ENST00000488839 IDI2Q9BXS1 227 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 ZBTB40Q9NUA8 1239 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 USP40Q9NVE5 1235 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
SFXN5-219ENST00000488839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.18■□□□□ 0.02
SFXN5-219ENST00000488839 OTUD7BQ6GQQ9 843 aa15.17■□□□□ 0.02
SFXN5-219ENST00000488839 TMED8Q6PL24 325 aaPredicted RBP15.17■□□□□ 0.02
SFXN5-219ENST00000488839 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
SFXN5-219ENST00000488839 CSADQ9Y600 493 aa15.17■□□□□ 0.02
SFXN5-219ENST00000488839 GPR75-ASB3A0A0A6YYF3 556 aa15.16■□□□□ 0.02
SFXN5-219ENST00000488839 TESPA1A2RU30 521 aaPredicted RBP15.16■□□□□ 0.02
SFXN5-219ENST00000488839 CACNB3P54284 484 aa15.16■□□□□ 0.02
SFXN5-219ENST00000488839 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
SFXN5-219ENST00000488839 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.16■□□□□ 0.02
SFXN5-219ENST00000488839 CLMNQ96JQ2 1002 aa15.16■□□□□ 0.02
SFXN5-219ENST00000488839 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
SFXN5-219ENST00000488839 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.16■□□□□ 0.02
SFXN5-219ENST00000488839 MROH7-TTC4A0A0A0MT08 1334 aa15.16■□□□□ 0.02
SFXN5-219ENST00000488839 MCAMP43121 646 aa15.15■□□□□ 0.02
SFXN5-219ENST00000488839 MECOMQ03112 1051 aa15.15■□□□□ 0.02
SFXN5-219ENST00000488839 NSUN4Q96CB9 384 aaKnown RBP15.15■□□□□ 0.02
SFXN5-219ENST00000488839 FZD1Q9UP38 647 aa15.15■□□□□ 0.02
SFXN5-219ENST00000488839 COG6Q9Y2V7 657 aa15.15■□□□□ 0.02
SFXN5-219ENST00000488839 LAMB1P07942 1786 aa15.15■□□□□ 0.02
SFXN5-219ENST00000488839 VGLL4Q14135 290 aa15.14■□□□□ 0.01
SFXN5-219ENST00000488839 DBNDD2Q9BQY9 259 aa15.14■□□□□ 0.01
SFXN5-219ENST00000488839 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
SFXN5-219ENST00000488839 FAM198AQ9UFP1 575 aa15.14■□□□□ 0.01
SFXN5-219ENST00000488839 ZNF112Q9UJU3 913 aa15.14■□□□□ 0.01
SFXN5-219ENST00000488839 SPDYE5A6NIY4 337 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 RAB11FIP3O75154 756 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 PYGBP11216 843 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 GTF2A2P52657 109 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 MAP3K10Q02779 954 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 NFIAQ12857 509 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 MKRN3Q13064 507 aaKnown RBP15.13■□□□□ 0.01
SFXN5-219ENST00000488839 ERO1BQ86YB8 467 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
SFXN5-219ENST00000488839 OPTNQ96CV9 577 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 ELP3Q9H9T3 547 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 DBNLQ9UJU6 430 aaKnown RBP15.13■□□□□ 0.01
SFXN5-219ENST00000488839 MYH2Q9UKX2 1941 aa15.13■□□□□ 0.01
SFXN5-219ENST00000488839 BAG3O95817 575 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 BTDP43251 543 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 PPATQ06203 517 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 TCP10Q12799 353 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 PKN2Q16513 984 aaKnown RBP15.12■□□□□ 0.01
SFXN5-219ENST00000488839 CERS3Q8IU89 383 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 KIF1BPQ96EK5 621 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 ABHD8Q96I13 439 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 WRNIP1Q96S55 665 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 ZCCHC17Q9NP64 241 aaKnown RBP15.12■□□□□ 0.01
SFXN5-219ENST00000488839 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
SFXN5-219ENST00000488839 RFX7Q2KHR2 1363 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 GPR25O00155 361 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 WDHD1O75717 1129 aaPredicted RBP15.11■□□□□ 0.01
SFXN5-219ENST00000488839 RGS3P49796 1198 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 RHBDL3P58872 404 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 PPP4CP60510 307 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 NOL9Q5SY16 702 aaKnown RBP15.11■□□□□ 0.01
SFXN5-219ENST00000488839 TBC1D9Q6ZT07 1266 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 CLASRPQ8N2M8 674 aaKnown RBP15.11■□□□□ 0.01
SFXN5-219ENST00000488839 ZNF384Q8TF68 577 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
SFXN5-219ENST00000488839 EXOC6BQ9Y2D4 811 aa15.11■□□□□ 0.01
SFXN5-219ENST00000488839 TBC1D12O60347 775 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
SFXN5-219ENST00000488839 GJA5P36382 358 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 MMRN1Q13201 1228 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 PPIL2Q13356 520 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 DGKZQ13574 1117 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 NAA16Q6N069 864 aaPredicted RBP15.1■□□□□ 0.01
SFXN5-219ENST00000488839 PI16Q6UXB8 463 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 CTU1Q7Z7A3 348 aaKnown RBP15.1■□□□□ 0.01
SFXN5-219ENST00000488839 SPNS2Q8IVW8 549 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.1■□□□□ 0.01
SFXN5-219ENST00000488839 MCOLN1Q9GZU1 580 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 CCDC8Q9H0W5 538 aaPredicted RBP15.1■□□□□ 0.01
SFXN5-219ENST00000488839 SNCAIPQ9Y6H5 919 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 CASP8AP2Q9UKL3 1982 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 ATRNL1Q5VV63 1379 aa15.1■□□□□ 0.01
SFXN5-219ENST00000488839 COL2A1P02458 1487 aaPredicted RBP15.09■□□□□ 0.01
SFXN5-219ENST00000488839 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
SFXN5-219ENST00000488839 FKTNO75072 461 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms