RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 LINC00301Q8NCQ3 95 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 HNRNPLLQ8WVV9 542 aaKnown RBP18.41■□□□□ 0.54
MCF2L-229ENST00000488765 MIEF2Q96C03 454 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 CRACR2AQ9BSW2 395 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 CBFA2T2O43439 604 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 ELF1P32519 619 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 STIM1Q13586 685 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 FAM76AQ8TAV0 307 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 CALR3Q96L12 384 aaKnown RBP18.41■□□□□ 0.54
MCF2L-229ENST00000488765 ODF2LQ9ULJ1 636 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 GCP02774 474 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 PDCLQ13371 301 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 SYNE3Q6ZMZ3 975 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 GRAMD1CQ8IYS0 662 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 ZKSCAN4Q969J2 545 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-229ENST00000488765 SCLT1Q96NL6 688 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 KIF20BQ96Q89 1820 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 SYKP43405 635 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 RAB21Q9UL25 225 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 NFE2L3Q9Y4A8 694 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 SBNO1A3KN83 1393 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 NEDD4P46934 1319 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 CDHR2Q9BYE9 1310 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 NDUFAB1O14561 156 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 PPP1R12BO60237 982 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-229ENST00000488765 CDC25CP30307 473 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 KCTD19Q17RG1 926 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-229ENST00000488765 FOXP4Q8IVH2 680 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-229ENST00000488765 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 CABS1Q96KC9 395 aa18.4■□□□□ 0.54
MCF2L-229ENST00000488765 USP8P40818 1118 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-229ENST00000488765 GUCA1BQ9UMX6 200 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 STX10O60499 249 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 PRPF6O94906 941 aaKnown RBP18.39■□□□□ 0.53
MCF2L-229ENST00000488765 CDC25AP30304 524 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 SPECC1LQ69YQ0 1117 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 STOX1Q6ZVD7 989 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 VEZTQ9HBM0 779 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 OVOS2A0A0J9YW53 1432 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 OVOS2Q6IE36 1432 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
MCF2L-229ENST00000488765 SHTN1A0MZ66 631 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 TAF5LO75529 589 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 USP5P45974 858 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 FMR1Q06787 632 aaKnown RBP eCLIP18.38■□□□□ 0.53
MCF2L-229ENST00000488765 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 SH2D3CQ8N5H7 860 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 CAPS2Q9BXY5 557 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.38■□□□□ 0.53
MCF2L-229ENST00000488765 PCDHA5Q9Y5H7 936 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 TECPR2O15040 1411 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 GPTP24298 496 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
MCF2L-229ENST00000488765 RBL2Q08999 1139 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 HPCAL4Q9UM19 191 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 PDHBP11177 359 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 POLA2Q14181 598 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 CWF19L2Q2TBE0 894 aaKnown RBP18.38■□□□□ 0.53
MCF2L-229ENST00000488765 MSANTD4Q8NCY6 345 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 KCNB2Q92953 911 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 TEX13AQ9BXU3 409 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-229ENST00000488765 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
MCF2L-229ENST00000488765 EIF4E1BA6NMX2 242 aaKnown RBP18.37■□□□□ 0.53
MCF2L-229ENST00000488765 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 BMP6P22004 513 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 NAA25Q14CX7 972 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 ARMC3Q5W041 872 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 IGSF1Q8N6C5 1336 aa18.37■□□□□ 0.53
MCF2L-229ENST00000488765 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
MCF2L-229ENST00000488765 FAXDC2Q96IV6 333 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 MYL6BP14649 208 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 NEDD9Q14511 834 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 RRP36Q96EU6 259 aaKnown RBP18.36■□□□□ 0.53
MCF2L-229ENST00000488765 GOLGA6L9A6NEM1 432 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 ANKRD24Q8TF21 1146 aa18.36■□□□□ 0.53
MCF2L-229ENST00000488765 PFKFB2O60825 505 aa18.35■□□□□ 0.53
MCF2L-229ENST00000488765 RXRAP19793 462 aa18.35■□□□□ 0.53
MCF2L-229ENST00000488765 CLNS1AP54105 237 aaKnown RBP18.35■□□□□ 0.53
MCF2L-229ENST00000488765 CCDC148Q8NFR7 591 aa18.35■□□□□ 0.53
MCF2L-229ENST00000488765 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
MCF2L-229ENST00000488765 MMS19Q96T76 1030 aa18.35■□□□□ 0.53
MCF2L-229ENST00000488765 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 BACH1O14867 736 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 PPP1R12AO14974 1030 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 FDPSP14324 419 aaKnown RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 CCNHP51946 323 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 HAND2P61296 217 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 C8orf76Q96K31 380 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms