RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
CXCL12-207ENST00000488591 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
CXCL12-207ENST00000488591 MAP3K9P80192 1104 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 B4GALNT3Q6L9W6 998 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 RASAL3Q86YV0 1011 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 ZFPM1Q8IX07 1006 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 AIDAQ96BJ3 306 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 CSRNP1Q96S65 589 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 BEGAINQ9BUH8 593 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 ZNF341Q9BYN7 854 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 DDX4Q9NQI0 724 aaKnown RBP18.23■□□□□ 0.51
CXCL12-207ENST00000488591 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.23■□□□□ 0.51
CXCL12-207ENST00000488591 CSADQ9Y600 493 aa18.23■□□□□ 0.51
CXCL12-207ENST00000488591 RFX7Q2KHR2 1363 aa18.22■□□□□ 0.51
CXCL12-207ENST00000488591 TSHZ3Q63HK5 1081 aa18.22■□□□□ 0.51
CXCL12-207ENST00000488591 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
CXCL12-207ENST00000488591 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
CXCL12-207ENST00000488591 MIGA1Q8NAN2 632 aa18.22■□□□□ 0.51
CXCL12-207ENST00000488591 ZNF532Q9HCE3 1301 aa18.22■□□□□ 0.51
CXCL12-207ENST00000488591 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
CXCL12-207ENST00000488591 USP5P45974 858 aa18.21■□□□□ 0.51
CXCL12-207ENST00000488591 DYNLL1P63167 89 aaKnown RBP18.21■□□□□ 0.51
CXCL12-207ENST00000488591 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
CXCL12-207ENST00000488591 LRRFIP1Q32MZ4 808 aaKnown RBP18.21■□□□□ 0.51
CXCL12-207ENST00000488591 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
CXCL12-207ENST00000488591 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
CXCL12-207ENST00000488591 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
CXCL12-207ENST00000488591 LNPKQ9C0E8 428 aa18.21■□□□□ 0.51
CXCL12-207ENST00000488591 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
CXCL12-207ENST00000488591 DDTLA6NHG4 134 aaPredicted RBP18.2■□□□□ 0.5
CXCL12-207ENST00000488591 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
CXCL12-207ENST00000488591 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
CXCL12-207ENST00000488591 NUCB1Q02818 461 aa18.2■□□□□ 0.5
CXCL12-207ENST00000488591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
CXCL12-207ENST00000488591 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
CXCL12-207ENST00000488591 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
CXCL12-207ENST00000488591 DHX36Q9H2U1 1008 aaKnown RBP18.2■□□□□ 0.5
CXCL12-207ENST00000488591 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
CXCL12-207ENST00000488591 TCRBV5S4A2TA0A5A2 114 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 ADD2P35612 726 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 UBE3CQ15386 1083 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 SH3BP5LQ7L8J4 393 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 KBTBD3Q8NAB2 608 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 WBP1LQ9NX94 342 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 STAP2Q9UGK3 403 aa18.19■□□□□ 0.5
CXCL12-207ENST00000488591 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 ZBTB48P10074 688 aaPredicted RBP18.18■□□□□ 0.5
CXCL12-207ENST00000488591 PDE1AP54750 535 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 VGLL4Q14135 290 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
CXCL12-207ENST00000488591 WNK4Q96J92 1243 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 RIOK1Q9BRS2 568 aaKnown RBP18.18■□□□□ 0.5
CXCL12-207ENST00000488591 CRNKL1Q9BZJ0 848 aaKnown RBP18.18■□□□□ 0.5
CXCL12-207ENST00000488591 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
CXCL12-207ENST00000488591 FLT1P17948 1338 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 SALL3Q9BXA9 1300 aa18.18■□□□□ 0.5
CXCL12-207ENST00000488591 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-207ENST00000488591 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-207ENST00000488591 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
CXCL12-207ENST00000488591 ZIC5Q96T25 663 aa18.17■□□□□ 0.5
CXCL12-207ENST00000488591 PI4KBQ9UBF8 816 aa18.17■□□□□ 0.5
CXCL12-207ENST00000488591 ZNF112Q9UJU3 913 aa18.17■□□□□ 0.5
CXCL12-207ENST00000488591 MYH7P12883 1935 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 CA12O43570 354 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 TBC1D12O60347 775 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 HLA-DOAP06340 250 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 SREBF2Q12772 1141 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
CXCL12-207ENST00000488591 OPTNQ96CV9 577 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
CXCL12-207ENST00000488591 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.16■□□□□ 0.5
CXCL12-207ENST00000488591 FOCADQ5VW36 1801 aa18.15■□□□□ 0.5
CXCL12-207ENST00000488591 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
CXCL12-207ENST00000488591 RNF113AO15541 343 aaKnown RBP18.15■□□□□ 0.5
CXCL12-207ENST00000488591 INHBEP58166 350 aa18.15■□□□□ 0.5
CXCL12-207ENST00000488591 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
CXCL12-207ENST00000488591 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
CXCL12-207ENST00000488591 SAP30BPQ9UHR5 308 aaKnown RBP18.15■□□□□ 0.5
CXCL12-207ENST00000488591 HERC5Q9UII4 1024 aaKnown RBP18.15■□□□□ 0.5
CXCL12-207ENST00000488591 CDK5RAP2Q96SN8 1893 aa18.15■□□□□ 0.5
CXCL12-207ENST00000488591 OTOFQ9HC10 1997 aa18.15■□□□□ 0.5
CXCL12-207ENST00000488591 MBD4O95243 580 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 NEFLP07196 543 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 INPP5BP32019 993 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 CTCFP49711 727 aaPredicted RBP18.14■□□□□ 0.49
CXCL12-207ENST00000488591 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 ERO1BQ86YB8 467 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 LCORLQ8N3X6 602 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 CRACR2BQ8N4Y2 399 aaPredicted RBP18.14■□□□□ 0.49
CXCL12-207ENST00000488591 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 DDRGK1Q96HY6 314 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 ARMT1Q9H993 441 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 PALD1Q9ULE6 856 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
CXCL12-207ENST00000488591 SPDYE5A6NIY4 337 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms