RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 GAS6Q14393 721 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ALDH1L2Q3SY69 923 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 TTC22Q5TAA0 569 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 TMEM214Q6NUQ4 689 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 RIPOR1Q6ZS17 1223 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 NBPF15Q8N660 670 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 RHBDD1Q8TEB9 315 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 SSH1Q8WYL5 1049 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 CHAMP1Q96JM3 812 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 C16orf45Q96MC5 204 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ASB16Q96NS5 453 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 CARD10Q9BWT7 1032 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 NIFKQ9BYG3 293 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ST7Q9NRC1 585 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 V9GYY5 206 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 FANCAO15360 1455 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ELP1O95163 1332 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 LOC102724159A0A0B4J2E5 919 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ATP8B1O43520 1251 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 GADD45BO75293 160 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZNF16P17020 682 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 PTGS1P23219 599 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 PHKA2P46019 1235 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 UBE2HP62256 183 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 TPM4P67936 248 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 DGKZQ13574 1117 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 PWP2Q15269 919 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 TEX35Q5T0J7 233 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 SYT10Q6XYQ8 523 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 PRICKLE2Q7Z3G6 844 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 FBXO33Q7Z6M2 555 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 SRLQ86TD4 932 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 DHX37Q8IY37 1157 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZNF837Q96EG3 531 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 TMX3Q96JJ7 454 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 L2HGDHQ9H9P8 463 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 PSD3Q9NYI0 1048 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 CWC15Q9P013 229 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZNF215Q9UL58 517 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 DYRK1BQ9Y463 629 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 CEP83Q9Y592 693 aa5.6□□□□□ -1.51
CDC42BPA-213ENST00000488131 WDR33Q9C0J8 1336 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 TCHHQ07283 1943 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 KIF24Q5T7B8 1368 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 PREX2Q70Z35 1606 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 CD109Q6YHK3 1445 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 KIF2AO00139 706 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 HTATSF1O43719 755 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 KIF1CO43896 1103 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZRANB2O95218 330 aaKnown RBP eCLIP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 APPP05067 770 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 CCDC172P0C7W6 258 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 PNMA6AP0CW24 399 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 ERCC3P19447 782 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 CDC25BP30305 580 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 PLA2G4AP47712 749 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 LMOD3Q0VAK6 560 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 POU4F2Q12837 409 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 RTN1Q16799 776 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 SLC27A3Q5K4L6 730 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 ANKRD45Q5TZF3 282 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 CEP135Q66GS9 1140 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZSCAN25Q6NSZ9 544 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 TMC7Q7Z402 723 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 USP48Q86UV5 1035 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 GOLGA6L1Q8N7Z2 621 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 KIAA1522Q9P206 1035 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 KCNG1Q9UIX4 513 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 ABCA8O94911 1581 aa5.59□□□□□ -1.51
CDC42BPA-213ENST00000488131 TDRD9Q8NDG6 1382 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-213ENST00000488131 SSH2Q76I76 1423 aa5.59□□□□□ -1.52
CDC42BPA-213ENST00000488131 COL3A1P02461 1466 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 A0A1B0GUL7 405 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 SPATA31C2B4DYI2 1134 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 PIK3R2O00459 728 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 NEMFO60524 1076 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 SLU7O95391 586 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 MAP2K3P46734 347 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ANAPC15P60006 121 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 GPS2Q13227 327 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ELF2Q15723 593 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 C11orf91Q3C1V1 193 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 PLA2G4DQ86XP0 818 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 SUGP1Q8IWZ8 645 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 GOLGA5Q8TBA6 731 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ARHGAP45Q92619 1136 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 ZBTB9Q96C00 473 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CHMP4CQ96CF2 233 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 RBCK1Q9BYM8 510 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CUEDC1Q9NWM3 386 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 DONSONQ9NYP3 566 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 NOB1Q9ULX3 412 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CHMP3Q9Y3E7 222 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 CDC42BPGQ6DT37 1551 aa5.58□□□□□ -1.52
CDC42BPA-213ENST00000488131 SAMD9LQ8IVG5 1584 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms