RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 TYRO3Q06418 890 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 IFNL2Q8IZJ0 200 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 KCTD17Q8N5Z5 321 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 GPR161Q8N6U8 529 aaKnown RBP8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 PANK3Q9H999 370 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 CD2APQ9Y5K6 639 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 EFSO43281 561 aa8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 ABL1P00519 1130 aa8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 MAPTP10636 758 aaKnown RBP8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 DMGDHQ9UI17 866 aaKnown RBP8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 DNMT3AQ9Y6K1 912 aaPredicted RBP8.64□□□□□ -1.03
TNFSF4-203ENST00000488053 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 MICAL2O94851 1124 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 EPB42P16452 691 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 FGFR3P22607 806 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 GAS6Q14393 721 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 TREML1Q86YW5 311 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 BRD7Q9NPI1 651 aa8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 N4BP2Q86UW6 1770 aaPredicted RBP8.63□□□□□ -1.03
TNFSF4-203ENST00000488053 MX2P20592 715 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 SERPINB4P48594 390 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 IDH3AP50213 366 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 ARSDP51689 593 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 ETFBKMTQ8IXQ9 262 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 MBIPQ9NS73 344 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 MARK1Q9P0L2 795 aa8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
TNFSF4-203ENST00000488053 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 COL5A3P25940 1745 aaPredicted RBP8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 FAM13AO94988 1023 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 MMP10P09238 476 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 INPP5BP32019 993 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 GMPRP36959 345 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 ZNF211Q13398 564 aaPredicted RBP8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 PLEKHO1Q53GL0 409 aaPredicted RBP8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 KDM6AO15550 1401 aaPredicted RBP8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 KDRP35968 1356 aa8.61□□□□□ -1.03
TNFSF4-203ENST00000488053 ERVV-2B6SEH9 535 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 ICMTO60725 284 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 NPR3P17342 541 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 CABP4P57796 275 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 MTMR3Q13615 1198 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 RNFT1Q5M7Z0 435 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 ALKBH2Q6NS38 261 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 C4AP0C0L4 1744 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
TNFSF4-203ENST00000488053 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 CLSPNQ9HAW4 1339 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 BMP4P12644 408 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 CD33P20138 364 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 MTHFSP49914 203 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 SULT6B1Q6IMI4 303 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 C11orf16Q9NQ32 467 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 ANO2Q9NQ90 1003 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 ADCY9O60503 1353 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 KIF13BQ9NQT8 1826 aa8.59□□□□□ -1.03
TNFSF4-203ENST00000488053 PXDNLA1KZ92 1463 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 A0A0G2JLW4 131 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 H3BRB1 525 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 HSP90AB1P08238 724 aaKnown RBP8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 MPSTP25325 297 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 RFC4P35249 363 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 ZAP70P43403 619 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 MAP2K3P46734 347 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 KRT76Q01546 638 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 SRSF11Q05519 484 aaKnown RBP8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 AMOTQ4VCS5 1084 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 C1orf141Q5JVX7 400 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 TUT1Q9H6E5 874 aaKnown RBP8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 KNSTRNQ9Y448 316 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 IVNS1ABPQ9Y6Y0 642 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 SCN11AQ9UI33 1791 aa8.58□□□□□ -1.04
TNFSF4-203ENST00000488053 TJP1Q07157 1748 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 CEP350Q5VT06 3117 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 ZNF831Q5JPB2 1677 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 OPLAHO14841 1288 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms