RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 MAPK8IP1Q9UQF2 711 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 POLR3KQ9Y2Y1 108 aaPredicted RBP4.68□□□□□ -1.66
GPNMB-212ENST00000487890 FMN1Q68DA7 1419 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 RICTORQ6R327 1708 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 LRRIQ1Q96JM4 1722 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 FANCAO15360 1455 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 NEO1Q92859 1461 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 ARHGAP35Q9NRY4 1499 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 KIF14Q15058 1648 aa4.68□□□□□ -1.66
GPNMB-212ENST00000487890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 PCF11O94913 1555 aaKnown RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 FRMPD1Q5SYB0 1578 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 GHRHP01286 108 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 CDK8P49336 464 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 GYS2P54840 703 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 CASP7P55210 303 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 TBC1D8BQ0IIM8 1120 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 IFRD2Q12894 506 aaPredicted RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 PPP2R5EQ16537 467 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 LLGL2Q6P1M3 1020 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 LSRQ86X29 649 aaPredicted RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 HOMER1Q86YM7 354 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 SULF2Q8IWU5 870 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 RPUSD2Q8IZ73 545 aaKnown RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 RBBP8NLQ8NC74 664 aaPredicted RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 OR6P1Q8NGX9 317 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 APPBP2Q92624 585 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 GAL3ST3Q96A11 431 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 ANTXR1Q9H6X2 564 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 EHMT1Q9H9B1 1298 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 CBX8Q9HC52 389 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 ATXN7L1Q9ULK2 861 aaPredicted RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 SOX13Q9UN79 622 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 LEMD3Q9Y2U8 911 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 SAMM50Q9Y512 469 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 PCDHB14Q9Y5E9 798 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 DENND4BO75064 1496 aaPredicted RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 RIMS1Q86UR5 1692 aaKnown RBP4.67□□□□□ -1.66
GPNMB-212ENST00000487890 ARHGEF40Q8TER5 1519 aa4.67□□□□□ -1.66
GPNMB-212ENST00000487890 PHLDB1Q86UU1 1377 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 HECW2Q9P2P5 1572 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 CLIP1P30622 1438 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 AKNAQ7Z591 1439 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 B2RBV5 119 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 PPP1R12AO14974 1030 aaPredicted RBP4.66□□□□□ -1.66
GPNMB-212ENST00000487890 GRIN3BO60391 1043 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 DIAPH1O60610 1272 aaKnown RBP4.66□□□□□ -1.66
GPNMB-212ENST00000487890 GJB6O95452 261 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 EIF2AK2P19525 551 aaKnown RBP4.66□□□□□ -1.66
GPNMB-212ENST00000487890 FGFR3P22607 806 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 ZNF252P-AS1Q0IIN9 211 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 LRRC14Q15048 493 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 FXNQ16595 210 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 TKFCQ3LXA3 575 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 FAM182BQ5T319 152 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.66□□□□□ -1.66
GPNMB-212ENST00000487890 KIAA0907Q7Z7F0 614 aaPredicted RBP4.66□□□□□ -1.66
GPNMB-212ENST00000487890 CCDC155Q8N6L0 562 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 ZNF837Q96EG3 531 aaPredicted RBP4.66□□□□□ -1.66
GPNMB-212ENST00000487890 ADAM19Q9H013 955 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 TMEM260Q9NX78 707 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 ARHGAP5Q13017 1502 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 BCORL1Q5H9F3 1711 aa4.66□□□□□ -1.66
GPNMB-212ENST00000487890 MADDQ8WXG6 1647 aa4.65□□□□□ -1.66
GPNMB-212ENST00000487890 A0A1W2PQH9 124 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 AXIN1O15169 862 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 SMNDC1O75940 238 aaKnown RBP eCLIP4.65□□□□□ -1.67
GPNMB-212ENST00000487890 ATE1O95260 518 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 BPNT1O95861 308 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 ESRRAP11474 423 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-212ENST00000487890 IMPDH2P12268 514 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 CPB1P15086 417 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 SELPP16109 830 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 AMPD3Q01432 767 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 RPL6Q02878 288 aaKnown RBP4.65□□□□□ -1.67
GPNMB-212ENST00000487890 NEUROD1Q13562 356 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 MLECQ14165 292 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 PERM1Q5SV97 790 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 SPATC1Q76KD6 591 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 SYT9Q86SS6 491 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 PDZD3Q86UT5 571 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 UBE2OQ9C0C9 1292 aaKnown RBP4.65□□□□□ -1.67
GPNMB-212ENST00000487890 LACRTQ9GZZ8 138 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 SLKQ9H2G2 1235 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-212ENST00000487890 SH2B1Q9NRF2 756 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-212ENST00000487890 KLHL42Q9P2K6 505 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 PFDN2Q9UHV9 154 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 DACH1Q9UI36 760 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 PRR12Q9ULL5 1215 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 TRIM33Q9UPN9 1127 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 ZFYVE16Q7Z3T8 1539 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 FER1L4A9Z1Z3 1794 aa4.65□□□□□ -1.67
GPNMB-212ENST00000487890 TROQ12816 1431 aaPredicted RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 ADAMTSL3P82987 1691 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 CCDC18Q5T9S5 1454 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 CDC42BPAQ5VT25 1732 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 CDC42BPBQ9Y5S2 1711 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 SOX1O00570 391 aaPredicted RBP4.64□□□□□ -1.67
GPNMB-212ENST00000487890 C2CD2LO14523 706 aa4.64□□□□□ -1.67
GPNMB-212ENST00000487890 DGAT1O75907 488 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms