RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 FAM181AQ8N9Y4 354 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 ALKBH8Q96BT7 664 aaKnown RBP7.4□□□□□ -1.22
UBR3-211ENST00000487689 TOX2Q96NM4 488 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 TRIM56Q9BRZ2 755 aaKnown RBP7.4□□□□□ -1.22
UBR3-211ENST00000487689 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 ABCB6Q9NP58 842 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 SYNGAP1Q96PV0 1343 aa7.39□□□□□ -1.23
UBR3-211ENST00000487689 PRRG2O14669 202 aa7.39□□□□□ -1.23
UBR3-211ENST00000487689 GPR182O15218 404 aa7.39□□□□□ -1.23
UBR3-211ENST00000487689 RAP1GAPP47736 663 aa7.39□□□□□ -1.23
UBR3-211ENST00000487689 ECM1Q16610 540 aa7.39□□□□□ -1.23
UBR3-211ENST00000487689 GSX1Q9H4S2 264 aaPredicted RBP7.39□□□□□ -1.23
UBR3-211ENST00000487689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
UBR3-211ENST00000487689 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
UBR3-211ENST00000487689 FCGRTP55899 365 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 ARHGAP27Q6ZUM4 889 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 WDR18Q9BV38 432 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 ZC3H12CQ9C0D7 883 aaKnown RBP7.38□□□□□ -1.23
UBR3-211ENST00000487689 DCTN4Q9UJW0 460 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 VAV3Q9UKW4 847 aa7.38□□□□□ -1.23
UBR3-211ENST00000487689 SOWAHDA6NJG2 315 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 B8ZZF3 427 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 RNGTTO60942 597 aaKnown RBP7.37□□□□□ -1.23
UBR3-211ENST00000487689 ID3Q02535 119 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 PRKCQQ04759 706 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 GRM2Q14416 872 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 MLANAQ16655 118 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 EPS8L3Q8TE67 593 aaKnown RBP7.37□□□□□ -1.23
UBR3-211ENST00000487689 KCNB2Q92953 911 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 SSU72Q9NP77 194 aaKnown RBP7.37□□□□□ -1.23
UBR3-211ENST00000487689 TMEM39AQ9NV64 488 aa7.37□□□□□ -1.23
UBR3-211ENST00000487689 ECEL1O95672 775 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 GSTP1P09211 210 aaKnown RBP7.36□□□□□ -1.23
UBR3-211ENST00000487689 LIG1P18858 919 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 MAPK1P28482 360 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 LRRC56Q8IYG6 542 aaPredicted RBP7.36□□□□□ -1.23
UBR3-211ENST00000487689 ZSCAN18Q8TBC5 510 aaPredicted RBP7.36□□□□□ -1.23
UBR3-211ENST00000487689 KRT82Q9NSB4 513 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 AKAP2Q9Y2D5 859 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 SAMM50Q9Y512 469 aa7.36□□□□□ -1.23
UBR3-211ENST00000487689 FAM87AP0C7U9 286 aa7.35□□□□□ -1.23
UBR3-211ENST00000487689 CDK5R2Q13319 367 aa7.35□□□□□ -1.23
UBR3-211ENST00000487689 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
UBR3-211ENST00000487689 EMILIN2Q9BXX0 1053 aa7.35□□□□□ -1.23
UBR3-211ENST00000487689 FAM53CQ9NYF3 392 aa7.35□□□□□ -1.23
UBR3-211ENST00000487689 U3KQE9 123 aa7.35□□□□□ -1.23
UBR3-211ENST00000487689 ZNF503-AS2A6NEH8 195 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 BRD1O95696 1058 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 BUD31P41223 144 aaPredicted RBP7.34□□□□□ -1.23
UBR3-211ENST00000487689 AOC3Q16853 763 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 TMC7Q7Z402 723 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 SMYD4Q8IYR2 804 aaPredicted RBP7.34□□□□□ -1.23
UBR3-211ENST00000487689 FLAD1Q8NFF5 587 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 CCDC86Q9H6F5 360 aaKnown RBP7.34□□□□□ -1.23
UBR3-211ENST00000487689 PICK1Q9NRD5 415 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 PPP1R9AQ9ULJ8 1098 aa7.34□□□□□ -1.23
UBR3-211ENST00000487689 PNMA6FA0A0J9YX94 578 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 TMPRSS2O15393 492 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 TSPAN15O95858 294 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 IFI16Q16666 785 aaKnown RBP7.33□□□□□ -1.24
UBR3-211ENST00000487689 ZSCAN29Q8IWY8 852 aaPredicted RBP7.33□□□□□ -1.24
UBR3-211ENST00000487689 HRASLS5Q96KN8 279 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 CBX8Q9HC52 389 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 CRIM1Q9NZV1 1036 aa7.33□□□□□ -1.24
UBR3-211ENST00000487689 ZSCAN22P10073 491 aaPredicted RBP7.32□□□□□ -1.24
UBR3-211ENST00000487689 FAAP100Q0VG06 881 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 SLC23A3Q6PIS1 610 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 SIAH1Q8IUQ4 282 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 FANCD2OSQ96PS1 177 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 PPP1R16BQ96T49 567 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 LMCD1Q9NZU5 365 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 PCOLCE2Q9UKZ9 415 aa7.32□□□□□ -1.24
UBR3-211ENST00000487689 GNEQ9Y223 722 aaKnown RBP7.32□□□□□ -1.24
UBR3-211ENST00000487689 ATP2B2Q01814 1243 aa7.31□□□□□ -1.24
UBR3-211ENST00000487689 KIF4BQ2VIQ3 1234 aa7.31□□□□□ -1.24
UBR3-211ENST00000487689 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR3-211ENST00000487689 ANGEL2Q5VTE6 544 aaKnown RBP7.31□□□□□ -1.24
UBR3-211ENST00000487689 ANKLE2Q86XL3 938 aa7.31□□□□□ -1.24
UBR3-211ENST00000487689 CEP44Q9C0F1 390 aa7.31□□□□□ -1.24
UBR3-211ENST00000487689 PRDM7Q9NQW5 492 aa7.31□□□□□ -1.24
UBR3-211ENST00000487689 IGHA2P01877 340 aa7.3□□□□□ -1.24
UBR3-211ENST00000487689 ARNTP27540 789 aa7.3□□□□□ -1.24
UBR3-211ENST00000487689 GSTT1P30711 240 aa7.3□□□□□ -1.24
UBR3-211ENST00000487689 MAP1SQ66K74 1059 aaPredicted RBP7.3□□□□□ -1.24
UBR3-211ENST00000487689 TTLL10Q6ZVT0 673 aa7.3□□□□□ -1.24
UBR3-211ENST00000487689 LIN37Q96GY3 246 aaPredicted RBP7.3□□□□□ -1.24
UBR3-211ENST00000487689 SRCIN1Q9C0H9 1055 aa7.3□□□□□ -1.24
UBR3-211ENST00000487689 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.29□□□□□ -1.24
UBR3-211ENST00000487689 HCLS1P14317 486 aaPredicted RBP7.29□□□□□ -1.24
UBR3-211ENST00000487689 NME2P22392 152 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms