RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TCP10Q12799 353 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 PDE3AQ14432 1141 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 GADL1Q6ZQY3 521 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
COL4A3-206ENST00000487633 ZNF341Q9BYN7 854 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 ANKRD2Q9GZV1 360 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 PIEZO1Q92508 2521 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 USP34Q70CQ2 3546 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 TRIM43BA6NCK2 446 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 PHF20L1A8MW92 1017 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 GRXCR1A8MXD5 290 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 PBX2P40425 430 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 TNNI2P48788 182 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 KCNQ1P51787 676 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 SMAD3P84022 425 aaKnown RBP7.57□□□□□ -1.2
COL4A3-206ENST00000487633 GOLGA2Q08379 1002 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 EPHA10Q5JZY3 1008 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 NOL9Q5SY16 702 aaKnown RBP7.57□□□□□ -1.2
COL4A3-206ENST00000487633 G2E3Q7L622 706 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 TRIM43Q96BQ3 446 aaPredicted RBP7.57□□□□□ -1.2
COL4A3-206ENST00000487633 MPHOSPH8Q99549 860 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 MBIPQ9NS73 344 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 BABAM1Q9NWV8 329 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 ZHX2Q9Y6X8 837 aa7.57□□□□□ -1.2
COL4A3-206ENST00000487633 MYH13Q9UKX3 1938 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 PI4KAP2A4QPH2 592 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 NEURL1BA8MQ27 555 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 BMP1P13497 986 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 PTPRAP18433 802 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 RTP1P59025 263 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 TRIM26Q12899 539 aaPredicted RBP7.56□□□□□ -1.2
COL4A3-206ENST00000487633 SH3BP5LQ7L8J4 393 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 ZNF804AQ7Z570 1209 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 PI4KAP1Q8N8J0 262 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 C8orf58Q8NAV2 365 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 ANKS1AQ92625 1134 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 COA7Q96BR5 231 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 LBHD1Q9BQE6 289 aaPredicted RBP7.56□□□□□ -1.2
COL4A3-206ENST00000487633 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
COL4A3-206ENST00000487633 PRDM12Q9H4Q4 367 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 TXNRD2Q9NNW7 524 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 FLRT1Q9NZU1 646 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 FAM198AQ9UFP1 575 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 TIMELESSQ9UNS1 1208 aa7.56□□□□□ -1.2
COL4A3-206ENST00000487633 MAPK8IP3Q9UPT6 1336 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 TRIM75PA6NK02 468 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 CXCL11O14625 94 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 DNAJB2P25686 324 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 FOXO4P98177 505 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 CHAF1AQ13111 956 aaPredicted RBP7.55□□□□□ -1.2
COL4A3-206ENST00000487633 RRP1BQ14684 758 aaKnown RBP7.55□□□□□ -1.2
COL4A3-206ENST00000487633 FAM83AQ86UY5 434 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 TSPYL6Q8N831 410 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 ATXN2LQ8WWM7 1075 aaKnown RBP7.55□□□□□ -1.2
COL4A3-206ENST00000487633 PLA2G12BQ9BX93 195 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 PRDM5Q9NQX1 630 aaPredicted RBP7.55□□□□□ -1.2
COL4A3-206ENST00000487633 THEGQ9P2T0 379 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 ATP11BQ9Y2G3 1177 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 SMCHD1A6NHR9 2005 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 RPAP1Q9BWH6 1393 aaPredicted RBP7.55□□□□□ -1.2
COL4A3-206ENST00000487633 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
COL4A3-206ENST00000487633 FAM196BA6NMK8 535 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 HOXB7P09629 217 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 CAPN2P17655 700 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 MRE11P49959 708 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 Q3C1V9 767 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 ANO1Q5XXA6 986 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 TRPV1Q8NER1 839 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 SMCR8Q8TEV9 937 aaPredicted RBP7.54□□□□□ -1.2
COL4A3-206ENST00000487633 USP6NLQ92738 828 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 ZDHHC15Q96MV8 337 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 CD320Q9NPF0 282 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 PDLIM7Q9NR12 457 aa7.54□□□□□ -1.2
COL4A3-206ENST00000487633 MYH2Q9UKX2 1941 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 RBAK-RBAKDNI3L0D1 243 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 NEFMP07197 916 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 HSP90B1P14625 803 aaKnown RBP7.53□□□□□ -1.2
COL4A3-206ENST00000487633 HIBADHP31937 336 aaKnown RBP7.53□□□□□ -1.2
COL4A3-206ENST00000487633 MRPS5P82675 430 aaKnown RBP7.53□□□□□ -1.2
COL4A3-206ENST00000487633 GCKRQ14397 625 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 DIXDC1Q155Q3 683 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 TRIM60Q495X7 471 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 GJC2Q5T442 439 aaPredicted RBP7.53□□□□□ -1.2
COL4A3-206ENST00000487633 DCAF15Q66K64 600 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 CDC42EP5Q6NZY7 148 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 SCYL3Q8IZE3 742 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 FAM151AQ8WW52 585 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 C1QTNF1Q9BXJ1 281 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 PORCNQ9H237 461 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 AGTPBP1Q9UPW5 1226 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 NDUFB9Q9Y6M9 179 aa7.53□□□□□ -1.2
COL4A3-206ENST00000487633 SIPA1L1O43166 1804 aa7.52□□□□□ -1.2
COL4A3-206ENST00000487633 PRRC2BQ5JSZ5 2229 aaKnown RBP7.52□□□□□ -1.2
COL4A3-206ENST00000487633 ANKRD18BA2A2Z9 1011 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms