RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 ZNF112Q9UJU3 913 aa14.03□□□□□ -0.16
SPEN-205ENST00000487496 INPP5BP32019 993 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 ZAP70P43403 619 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 PICALMQ13492 652 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 OTUD7BQ6GQQ9 843 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 AACSQ86V21 672 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 IL1RAPL2Q9NP60 686 aa14.02□□□□□ -0.17
SPEN-205ENST00000487496 ATRNL1Q5VV63 1379 aa14.01□□□□□ -0.17
SPEN-205ENST00000487496 DDTLA6NHG4 134 aaPredicted RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 MAP4K4O95819 1239 aaPredicted RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 GTF2A2P52657 109 aa14.01□□□□□ -0.17
SPEN-205ENST00000487496 NAA16Q6N069 864 aaPredicted RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 CTU1Q7Z7A3 348 aaKnown RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 ZSCAN29Q8IWY8 852 aaPredicted RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 BRI3BPQ8WY22 251 aa14.01□□□□□ -0.17
SPEN-205ENST00000487496 PIH1D3Q9NQM4 214 aaKnown RBP14.01□□□□□ -0.17
SPEN-205ENST00000487496 CCL15-CCL14A0A0B4J2E2 113 aa14□□□□□ -0.17
SPEN-205ENST00000487496 APBB1O00213 710 aa14□□□□□ -0.17
SPEN-205ENST00000487496 IRF6O14896 467 aa14□□□□□ -0.17
SPEN-205ENST00000487496 IGSF3O75054 1194 aa14□□□□□ -0.17
SPEN-205ENST00000487496 FKTNO75072 461 aa14□□□□□ -0.17
SPEN-205ENST00000487496 MAP3K10Q02779 954 aa14□□□□□ -0.17
SPEN-205ENST00000487496 PPATQ06203 517 aa14□□□□□ -0.17
SPEN-205ENST00000487496 PPIL2Q13356 520 aa14□□□□□ -0.17
SPEN-205ENST00000487496 CCL15Q16663 113 aa14□□□□□ -0.17
SPEN-205ENST00000487496 CLASRPQ8N2M8 674 aaKnown RBP14□□□□□ -0.17
SPEN-205ENST00000487496 KIF1BPQ96EK5 621 aa14□□□□□ -0.17
SPEN-205ENST00000487496 LAMB1P07942 1786 aa13.99□□□□□ -0.17
SPEN-205ENST00000487496 RAB11FIP3O75154 756 aa13.99□□□□□ -0.17
SPEN-205ENST00000487496 BAG3O95817 575 aa13.99□□□□□ -0.17
SPEN-205ENST00000487496 PPP4CP60510 307 aa13.99□□□□□ -0.17
SPEN-205ENST00000487496 NOL9Q5SY16 702 aaKnown RBP13.99□□□□□ -0.17
SPEN-205ENST00000487496 ADGRA1Q86SQ6 560 aa13.99□□□□□ -0.17
SPEN-205ENST00000487496 NOL10Q9BSC4 688 aaKnown RBP13.99□□□□□ -0.17
SPEN-205ENST00000487496 AATFQ9NY61 560 aaKnown RBP eCLIP13.99□□□□□ -0.17
SPEN-205ENST00000487496 NDUFB9Q9Y6M9 179 aa13.99□□□□□ -0.17
SPEN-205ENST00000487496 AK9Q5TCS8 1911 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 CCDC85CA6NKD9 419 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 PHF20L1A8MW92 1017 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 SLURP2P0DP57 97 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 CETPP11597 493 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 CRHR2Q13324 411 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
SPEN-205ENST00000487496 OSBPL5Q9H0X9 879 aaPredicted RBP13.98□□□□□ -0.17
SPEN-205ENST00000487496 ANTXR1Q9H6X2 564 aa13.98□□□□□ -0.17
SPEN-205ENST00000487496 IDH1O75874 414 aaKnown RBP13.97□□□□□ -0.17
SPEN-205ENST00000487496 IFIT2P09913 472 aaKnown RBP13.97□□□□□ -0.17
SPEN-205ENST00000487496 CYP7A1P22680 504 aa13.97□□□□□ -0.17
SPEN-205ENST00000487496 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
SPEN-205ENST00000487496 TBC1D12O60347 775 aa13.96□□□□□ -0.17
SPEN-205ENST00000487496 PLCG2P16885 1265 aa13.96□□□□□ -0.17
SPEN-205ENST00000487496 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
SPEN-205ENST00000487496 SCYL3Q8IZE3 742 aa13.96□□□□□ -0.17
SPEN-205ENST00000487496 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.17
SPEN-205ENST00000487496 KCNH4Q9UQ05 1017 aa13.96□□□□□ -0.17
SPEN-205ENST00000487496 COL2A1P02458 1487 aaPredicted RBP13.95□□□□□ -0.18
SPEN-205ENST00000487496 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
SPEN-205ENST00000487496 DYNLL1P63167 89 aaKnown RBP13.95□□□□□ -0.18
SPEN-205ENST00000487496 MAP3K12Q12852 859 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 TAF1CQ15572 869 aaPredicted RBP13.95□□□□□ -0.18
SPEN-205ENST00000487496 MAGEB6Q8N7X4 407 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPEN-205ENST00000487496 TGFBRAP1Q8WUH2 860 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPEN-205ENST00000487496 ZFYVE28Q9HCC9 887 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 PICK1Q9NRD5 415 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 ZHX2Q9Y6X8 837 aa13.95□□□□□ -0.18
SPEN-205ENST00000487496 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 CXCL11O14625 94 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 PTPRAP18433 802 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 SP3Q02447 781 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
SPEN-205ENST00000487496 MAPKAPK5Q8IW41 473 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 MIGA1Q8NAN2 632 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 DHX36Q9H2U1 1008 aaKnown RBP13.94□□□□□ -0.18
SPEN-205ENST00000487496 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
SPEN-205ENST00000487496 PI4KBQ9UBF8 816 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
SPEN-205ENST00000487496 FLT1P17948 1338 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 RRP1P56182 461 aaKnown RBP13.93□□□□□ -0.18
SPEN-205ENST00000487496 MOGSQ13724 837 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 TTF1Q15361 905 aaPredicted RBP13.93□□□□□ -0.18
SPEN-205ENST00000487496 ANKRD23Q86SG2 305 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 ERO1AQ96HE7 468 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 AFG3L2Q9Y4W6 797 aa13.93□□□□□ -0.18
SPEN-205ENST00000487496 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
SPEN-205ENST00000487496 GOLIM4O00461 696 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
SPEN-205ENST00000487496 TLR2O60603 784 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 FBXO46Q6PJ61 603 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms