RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
TRIM56-204ENST00000487252 CACNA1AO00555 2505 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 CHD9Q3L8U1 2897 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 PHF20L1A8MW92 1017 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 DDX58O95786 925 aaKnown RBP14.98□□□□□ -0.01
TRIM56-204ENST00000487252 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
TRIM56-204ENST00000487252 CWF19L2Q2TBE0 894 aaKnown RBP14.98□□□□□ -0.01
TRIM56-204ENST00000487252 AKNAD1Q5T1N1 836 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 ALYREFQ86V81 257 aaKnown RBP14.98□□□□□ -0.01
TRIM56-204ENST00000487252 FAM151AQ8WW52 585 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 ZHX2Q9Y6X8 837 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 REV3LO60673 3130 aa14.98□□□□□ -0.01
TRIM56-204ENST00000487252 PTPRAP18433 802 aa14.97□□□□□ -0.01
TRIM56-204ENST00000487252 KSR2Q6VAB6 950 aa14.97□□□□□ -0.01
TRIM56-204ENST00000487252 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
TRIM56-204ENST00000487252 FAM84BQ96KN1 310 aaPredicted RBP14.97□□□□□ -0.01
TRIM56-204ENST00000487252 TRIM35Q9UPQ4 493 aa14.97□□□□□ -0.01
TRIM56-204ENST00000487252 AGTPBP1Q9UPW5 1226 aa14.97□□□□□ -0.01
TRIM56-204ENST00000487252 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
TRIM56-204ENST00000487252 ATRNL1Q5VV63 1379 aa14.97□□□□□ -0.01
TRIM56-204ENST00000487252 RLFQ13129 1914 aa14.96□□□□□ -0.01
TRIM56-204ENST00000487252 ANKRD18BA2A2Z9 1011 aa14.96□□□□□ -0.01
TRIM56-204ENST00000487252 PI4KAP2A4QPH2 592 aa14.96□□□□□ -0.01
TRIM56-204ENST00000487252 HIBADHP31937 336 aaKnown RBP14.96□□□□□ -0.01
TRIM56-204ENST00000487252 CACNB2Q08289 660 aaPredicted RBP14.96□□□□□ -0.01
TRIM56-204ENST00000487252 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
TRIM56-204ENST00000487252 PI4KAP1Q8N8J0 262 aa14.96□□□□□ -0.01
TRIM56-204ENST00000487252 PRKAG2Q9UGJ0 569 aa14.96□□□□□ -0.01
TRIM56-204ENST00000487252 GYG1P46976 350 aa14.95□□□□□ -0.02
TRIM56-204ENST00000487252 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
TRIM56-204ENST00000487252 SENP6Q9GZR1 1112 aaPredicted RBP14.95□□□□□ -0.02
TRIM56-204ENST00000487252 LOC285556D6RIA3 1793 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 BMP1P13497 986 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 CCND3P30281 292 aaPredicted RBP14.94□□□□□ -0.02
TRIM56-204ENST00000487252 RTP1P59025 263 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 UBE4AQ14139 1066 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
TRIM56-204ENST00000487252 POTEEQ6S8J3 1075 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 HHIPL2Q6UWX4 724 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 BADQ92934 168 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
TRIM56-204ENST00000487252 MBIPQ9NS73 344 aa14.94□□□□□ -0.02
TRIM56-204ENST00000487252 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
TRIM56-204ENST00000487252 CYP2B6P20813 491 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 MAP3K10Q02779 954 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 GCKRQ14397 625 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 TREML2Q5T2D2 321 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 TRMT44Q8IYL2 757 aaKnown RBP14.93□□□□□ -0.02
TRIM56-204ENST00000487252 TBC1D22AQ8WUA7 517 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 USP6NLQ92738 828 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 NECAB3Q96P71 396 aaPredicted RBP14.93□□□□□ -0.02
TRIM56-204ENST00000487252 ZNF576Q9H609 170 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 EPHX3Q9H6B9 360 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 PNMA3Q9UL41 463 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 DOCK1Q14185 1865 aa14.93□□□□□ -0.02
TRIM56-204ENST00000487252 ZNF853P0CG23 659 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 DNAJB2P25686 324 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 MORF4L1Q9UBU8 362 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 SUGT1Q9Y2Z0 365 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 DOCK2Q92608 1830 aa14.92□□□□□ -0.02
TRIM56-204ENST00000487252 ATN1P54259 1190 aaPredicted RBP14.91□□□□□ -0.02
TRIM56-204ENST00000487252 IFIT5Q13325 482 aaKnown RBP14.91□□□□□ -0.02
TRIM56-204ENST00000487252 SNX17Q15036 470 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 TMEM31Q5JXX7 168 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 FBXO33Q7Z6M2 555 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 PROCA1Q8NCQ7 364 aaPredicted RBP14.91□□□□□ -0.02
TRIM56-204ENST00000487252 SOCS4Q8WXH5 440 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 P2RX7Q99572 595 aaKnown RBP14.91□□□□□ -0.02
TRIM56-204ENST00000487252 NUDT12Q9BQG2 462 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 C11orf16Q9NQ32 467 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 FAM198AQ9UFP1 575 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 CHD7Q9P2D1 2997 aa14.91□□□□□ -0.02
TRIM56-204ENST00000487252 DNM1LO00429 736 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 GPR37L1O60883 481 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 FOXO4P98177 505 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 TCP10Q12799 353 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 NFIAQ12857 509 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 CXXC1Q9P0U4 656 aaPredicted RBP14.9□□□□□ -0.02
TRIM56-204ENST00000487252 DAGLAQ9Y4D2 1042 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 MAST3O60307 1309 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 MYO9BQ13459 2157 aa14.9□□□□□ -0.02
TRIM56-204ENST00000487252 TRIM43BA6NCK2 446 aa14.89□□□□□ -0.03
TRIM56-204ENST00000487252 TRIM75PA6NK02 468 aa14.89□□□□□ -0.03
TRIM56-204ENST00000487252 ZKSCAN1P17029 563 aaPredicted RBP14.89□□□□□ -0.03
TRIM56-204ENST00000487252 EPHB4P54760 987 aa14.89□□□□□ -0.03
TRIM56-204ENST00000487252 IL27Q8NEV9 243 aa14.89□□□□□ -0.03
TRIM56-204ENST00000487252 PPM1EQ8WY54 764 aa14.89□□□□□ -0.03
TRIM56-204ENST00000487252 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
TRIM56-204ENST00000487252 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
TRIM56-204ENST00000487252 GAS2L1Q99501 681 aaPredicted RBP14.89□□□□□ -0.03
TRIM56-204ENST00000487252 PDLIM7Q9NR12 457 aa14.89□□□□□ -0.03
TRIM56-204ENST00000487252 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.88□□□□□ -0.03
TRIM56-204ENST00000487252 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.88□□□□□ -0.03
TRIM56-204ENST00000487252 PLIN1O60240 522 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 CTNND1O60716 968 aaKnown RBP14.88□□□□□ -0.03
TRIM56-204ENST00000487252 MRE11P49959 708 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms