RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 NFIAQ12857 509 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
NEK4-204ENST00000487068 FKBP1CQ5VVH2 108 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 FAM83AQ86UY5 434 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 RASAL3Q86YV0 1011 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 BOLA2Q9H3K6 86 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
NEK4-204ENST00000487068 PTPRFP10586 1907 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 FAM155AB1AL88 458 aaPredicted RBP12.41□□□□□ -0.42
NEK4-204ENST00000487068 BAG3O95817 575 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 CYP7A1P22680 504 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 SOX10P56693 466 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
NEK4-204ENST00000487068 AAMPQ13685 434 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 DDX60LQ5H9U9 1706 aaKnown RBP12.41□□□□□ -0.42
NEK4-204ENST00000487068 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 MAGEB6Q8N7X4 407 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 FAM151AQ8WW52 585 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 CSADQ9Y600 493 aa12.41□□□□□ -0.42
NEK4-204ENST00000487068 GPR75-ASB3A0A0A6YYF3 556 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 PLCG2P16885 1265 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 KIF23Q02241 960 aaPredicted RBP12.4□□□□□ -0.42
NEK4-204ENST00000487068 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 SLC10A4Q96EP9 437 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.42
NEK4-204ENST00000487068 TEPSINQ96N21 525 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 CSRNP1Q96S65 589 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 PDE4DIPQ5VU43 2346 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 RFX7Q2KHR2 1363 aa12.4□□□□□ -0.42
NEK4-204ENST00000487068 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 ANKRD45Q5TZF3 282 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 MIGA2Q7L4E1 593 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
NEK4-204ENST00000487068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
NEK4-204ENST00000487068 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
NEK4-204ENST00000487068 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 ZNF341Q9BYN7 854 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 RWDD1Q9H446 243 aaPredicted RBP12.39□□□□□ -0.43
NEK4-204ENST00000487068 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 RNF186Q9NXI6 227 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
NEK4-204ENST00000487068 TNRC18O15417 2968 aaPredicted RBP12.39□□□□□ -0.43
NEK4-204ENST00000487068 ENTPD3O75355 529 aa12.38□□□□□ -0.43
NEK4-204ENST00000487068 USP2O75604 605 aaPredicted RBP12.38□□□□□ -0.43
NEK4-204ENST00000487068 TRPA1O75762 1119 aa12.38□□□□□ -0.43
NEK4-204ENST00000487068 ATP5JP18859 108 aa12.38□□□□□ -0.43
NEK4-204ENST00000487068 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
NEK4-204ENST00000487068 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
NEK4-204ENST00000487068 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
NEK4-204ENST00000487068 ADGRA1Q86SQ6 560 aa12.38□□□□□ -0.43
NEK4-204ENST00000487068 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEK4-204ENST00000487068 DDX4Q9NQI0 724 aaKnown RBP12.38□□□□□ -0.43
NEK4-204ENST00000487068 ERC2O15083 957 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 IGSF3O75054 1194 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 WDHD1O75717 1129 aaPredicted RBP12.37□□□□□ -0.43
NEK4-204ENST00000487068 USP5P45974 858 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 RHBDL3P58872 404 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 CTU1Q7Z7A3 348 aaKnown RBP12.37□□□□□ -0.43
NEK4-204ENST00000487068 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 HAUS7Q99871 368 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
NEK4-204ENST00000487068 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
NEK4-204ENST00000487068 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
NEK4-204ENST00000487068 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
NEK4-204ENST00000487068 PDE6AP16499 860 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 MX1P20591 662 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
NEK4-204ENST00000487068 SREBF2Q12772 1141 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 VGLL4Q14135 290 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 PRPF38BQ5VTL8 546 aaKnown RBP12.36□□□□□ -0.43
NEK4-204ENST00000487068 CERS3Q8IU89 383 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 ZFPM1Q8IX07 1006 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
NEK4-204ENST00000487068 TGFBRAP1Q8WUH2 860 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 OPTNQ96CV9 577 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 WNK4Q96J92 1243 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 FLT1P17948 1338 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 ZNF532Q9HCE3 1301 aa12.36□□□□□ -0.43
NEK4-204ENST00000487068 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
NEK4-204ENST00000487068 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
NEK4-204ENST00000487068 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
NEK4-204ENST00000487068 SPRYD7Q5W111 196 aa12.35□□□□□ -0.43
NEK4-204ENST00000487068 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
NEK4-204ENST00000487068 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms