RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-227ENST00000486806 NAV1Q8NEY1 1877 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
MCF2L-227ENST00000486806 ROBO3Q96MS0 1386 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 CDK5RAP2Q96SN8 1893 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 ENTPD3O75355 529 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 HSPA4P34932 840 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 TDO2P48775 406 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 PICALMQ13492 652 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 NECTIN1Q15223 517 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 SBK1Q52WX2 424 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 CTR9Q6PD62 1173 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 FAM83AQ86UY5 434 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 KCNB2Q92953 911 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 NAPBQ9H115 298 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 GGA3Q9NZ52 723 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 TMOD2Q9NZR1 351 aa11.43□□□□□ -0.58
MCF2L-227ENST00000486806 LAMB1P07942 1786 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 APPP05067 770 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
MCF2L-227ENST00000486806 SH3BP5LQ7L8J4 393 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 PNMA8AQ86V59 439 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-227ENST00000486806 APOBEC3FQ8IUX4 373 aaKnown RBP11.42□□□□□ -0.58
MCF2L-227ENST00000486806 ZFPM1Q8IX07 1006 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 ZC3H15Q8WU90 426 aaKnown RBP11.42□□□□□ -0.58
MCF2L-227ENST00000486806 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 DDRGK1Q96HY6 314 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 VEZTQ9HBM0 779 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 MCM9Q9NXL9 1143 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 PGAP2Q9UHJ9 254 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 ANAPC4Q9UJX5 808 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 LAMA4Q16363 1823 aa11.42□□□□□ -0.58
MCF2L-227ENST00000486806 TCP10L2B9ZVM9 353 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 USP17L12C9JPN9 530 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 USP17L21D6R901 530 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 SMIM22K7EJ46 135 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 SLC27A2O14975 620 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 CYP21A2P08686 494 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 CYP2D6P10635 497 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 VEGFAP15692 232 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-227ENST00000486806 RBM25P49756 843 aaKnown RBP11.41□□□□□ -0.58
MCF2L-227ENST00000486806 EVX2Q03828 476 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 TNFAIP1Q13829 316 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 C12orf60Q5U649 245 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 CREB3L3Q68CJ9 461 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 FAM151AQ8WW52 585 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 TBC1D32Q96NH3 1257 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 NMRK2Q9NPI5 230 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 PALD1Q9ULE6 856 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
MCF2L-227ENST00000486806 SIPA1L1O43166 1804 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 DDTLA6NHG4 134 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-227ENST00000486806 PLCD1P51178 756 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 GABPAQ06546 454 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 PPARAQ07869 468 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 TCP10Q12799 353 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 RASA3Q14644 834 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 IMMTQ16891 758 aaKnown RBP11.4□□□□□ -0.58
MCF2L-227ENST00000486806 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 METTL16Q86W50 562 aaKnown RBP11.4□□□□□ -0.58
MCF2L-227ENST00000486806 TBC1D10CQ8IV04 446 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 TEPSINQ96N21 525 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 C22orf23Q9BZE7 217 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 TMEM39BQ9GZU3 492 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 EHD4Q9H223 541 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 DHX36Q9H2U1 1008 aaKnown RBP11.4□□□□□ -0.58
MCF2L-227ENST00000486806 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.58
MCF2L-227ENST00000486806 RRAGCQ9HB90 399 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
MCF2L-227ENST00000486806 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.58
MCF2L-227ENST00000486806 SSC5DA1L4H1 1573 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 ZNF213O14771 459 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 FGRP09769 529 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 MCCP23508 829 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 TNNI2P48788 182 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 ANAPC15P60006 121 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 HAND2P61296 217 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-227ENST00000486806 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 STOX1Q6ZVD7 989 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 DNAJC18Q9H819 358 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
MCF2L-227ENST00000486806 SNX14Q9Y5W7 946 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
MCF2L-227ENST00000486806 MINDY4BA8MYZ0 360 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 POLR3DP05423 398 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-227ENST00000486806 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 SLC4A8Q2Y0W8 1093 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 C16orf86Q6ZW13 317 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 TTC6Q86TZ1 520 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 LDHDQ86WU2 507 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms