RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 CICQ96RK0 1608 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 KIF24Q5T7B8 1368 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 SFI1A8K8P3 1242 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 TOMM70O94826 608 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 DPEP1P16444 411 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 ADH7P40394 386 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 TMF1P82094 1093 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 HTRA3P83110 453 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 GRIK4Q16099 956 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 MICALL1Q8N3F8 863 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 NFATC2IPQ8NCF5 419 aa8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-209ENST00000486235 MAP2P11137 1827 aaKnown RBP8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 PKD1L3Q7Z443 1732 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 ZBTB7BO15156 539 aaPredicted RBP8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 PHKG2P15735 406 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 TRAPPC3LQ5T215 181 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 ZNF280CQ8ND82 737 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 ATG3Q9NT62 314 aa8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 RTCBQ9Y3I0 505 aaKnown RBP8.91□□□□□ -0.98
TMEM39A-209ENST00000486235 C10orf71Q711Q0 1435 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 KIF20BQ96Q89 1820 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 SCO2A0A1W2PP80 73 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 TGFB2P61812 414 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 NKAPLQ5M9Q1 402 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 IFNL2Q8IZJ0 200 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 TNFRSF25Q93038 417 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 PHACTR1Q9C0D0 580 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 IGFLR1Q9H665 355 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 CCDC87Q9NVE4 849 aa8.9□□□□□ -0.98
TMEM39A-209ENST00000486235 NCAPD2Q15021 1401 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 N4BP2Q86UW6 1770 aaPredicted RBP8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 CLDN10P78369 228 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 FOXD4L6Q3SYB3 417 aaPredicted RBP8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 FOXD4L3Q6VB84 417 aaPredicted RBP8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 TRIM50Q86XT4 487 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 C16orf71Q8IYS4 520 aaPredicted RBP8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 PSMG3-AS1Q96PY0 264 aa8.89□□□□□ -0.99
TMEM39A-209ENST00000486235 KIAA1551Q9HCM1 1747 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 KDRP35968 1356 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 GYS1P13807 737 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 RFC4P35249 363 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 BHMTQ93088 406 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 GPC6Q9Y625 555 aaPredicted RBP8.88□□□□□ -0.99
TMEM39A-209ENST00000486235 WASHC2AQ641Q2 1341 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 USP17L3A6NCW0 530 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 NID1P14543 1247 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 TNNT2P45379 298 aaPredicted RBP8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 PSMA6P60900 246 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 COL13A1Q5TAT6 717 aaPredicted RBP8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 ADAMTS19Q8TE59 1207 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 SUSD3Q96L08 255 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 RNF181Q9P0P0 153 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 SRP68Q9UHB9 627 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 KIF13BQ9NQT8 1826 aa8.87□□□□□ -0.99
TMEM39A-209ENST00000486235 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 CNTNAP4Q9C0A0 1308 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 C4AP0C0L4 1744 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 DYRK3O43781 588 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 RPS6KA4O75676 772 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 KCNA3P22001 575 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 EIF4A2Q14240 407 aaKnown RBP8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 DALRD3Q5D0E6 543 aaKnown RBP8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 C1orf53Q5VUE5 145 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 TSEN2Q8NCE0 465 aaKnown RBP8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 PRDM6Q9NQX0 595 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 PIM2Q9P1W9 311 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 ANKIB1Q9P2G1 1089 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 POLKQ9UBT6 870 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 CHMP3Q9Y3E7 222 aa8.86□□□□□ -0.99
TMEM39A-209ENST00000486235 WDR90Q96KV7 1748 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 KDM2BQ8NHM5 1336 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 ERVV-2B6SEH9 535 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 PPP1R12BO60237 982 aaPredicted RBP8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 PTCD1O75127 700 aaKnown RBP8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 CHRNA5P30532 468 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 CABP4P57796 275 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 TYRO3Q06418 890 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 DDR1Q08345 913 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 C20orf204Q6ZNR8 217 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
TMEM39A-209ENST00000486235 NACC1Q96RE7 527 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms