RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MOGSQ13724 837 aa10.72□□□□□ -0.69
XRN1-212ENST00000486211 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
XRN1-212ENST00000486211 ANKLE1Q8NAG6 615 aa10.72□□□□□ -0.69
XRN1-212ENST00000486211 SYMPKQ92797 1274 aaKnown RBP10.72□□□□□ -0.69
XRN1-212ENST00000486211 FAM122AQ96E09 287 aa10.72□□□□□ -0.69
XRN1-212ENST00000486211 CDX2Q99626 313 aaPredicted RBP10.72□□□□□ -0.69
XRN1-212ENST00000486211 MYD88Q99836 296 aa10.72□□□□□ -0.69
XRN1-212ENST00000486211 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
XRN1-212ENST00000486211 HYPKQ9NX55 129 aa10.72□□□□□ -0.69
XRN1-212ENST00000486211 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
XRN1-212ENST00000486211 HOXB7P09629 217 aa10.71□□□□□ -0.69
XRN1-212ENST00000486211 IL1R1P14778 569 aa10.71□□□□□ -0.69
XRN1-212ENST00000486211 FLT3LGP49771 235 aa10.71□□□□□ -0.69
XRN1-212ENST00000486211 IRF5Q13568 498 aa10.71□□□□□ -0.69
XRN1-212ENST00000486211 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
XRN1-212ENST00000486211 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
XRN1-212ENST00000486211 ZKSCAN4Q969J2 545 aaPredicted RBP10.71□□□□□ -0.69
XRN1-212ENST00000486211 CWC25Q9NXE8 425 aaPredicted RBP10.71□□□□□ -0.69
XRN1-212ENST00000486211 MYH3P11055 1940 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 TCP10L2B9ZVM9 353 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 SNAP23O00161 211 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 CHL1O00533 1208 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 RBM5P52756 815 aaKnown RBP eCLIP10.7□□□□□ -0.7
XRN1-212ENST00000486211 C15orf52Q6ZUT6 534 aaKnown RBP10.7□□□□□ -0.7
XRN1-212ENST00000486211 RIC3Q7Z5B4 369 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
XRN1-212ENST00000486211 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 ANKRD2Q9GZV1 360 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 NBPF3Q9H094 633 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.7□□□□□ -0.7
XRN1-212ENST00000486211 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
XRN1-212ENST00000486211 KCNH4Q9UQ05 1017 aa10.7□□□□□ -0.7
XRN1-212ENST00000486211 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
XRN1-212ENST00000486211 PFASO15067 1338 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 RIPK4P57078 832 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 PPATQ06203 517 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 ZNF697Q5TEC3 545 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
XRN1-212ENST00000486211 SERPINA10Q9UK55 444 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 VPS9D1Q9Y2B5 631 aa10.69□□□□□ -0.7
XRN1-212ENST00000486211 A0A1B0GUL6 1792 aa10.68□□□□□ -0.7
XRN1-212ENST00000486211 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
XRN1-212ENST00000486211 CYP2C8P10632 490 aa10.68□□□□□ -0.7
XRN1-212ENST00000486211 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
XRN1-212ENST00000486211 DZIP1LQ8IYY4 767 aaKnown RBP10.68□□□□□ -0.7
XRN1-212ENST00000486211 PARK7Q99497 189 aaKnown RBP10.68□□□□□ -0.7
XRN1-212ENST00000486211 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
XRN1-212ENST00000486211 C11orf49Q9H6J7 331 aa10.68□□□□□ -0.7
XRN1-212ENST00000486211 CDH23Q9H251 3354 aa10.68□□□□□ -0.7
XRN1-212ENST00000486211 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
XRN1-212ENST00000486211 IGHMBP2P38935 993 aaKnown RBP10.67□□□□□ -0.7
XRN1-212ENST00000486211 TNNI2P48788 182 aa10.67□□□□□ -0.7
XRN1-212ENST00000486211 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
XRN1-212ENST00000486211 CHRNDQ07001 517 aa10.67□□□□□ -0.7
XRN1-212ENST00000486211 TJAP1Q5JTD0 557 aa10.67□□□□□ -0.7
XRN1-212ENST00000486211 MYLIPQ8WY64 445 aa10.67□□□□□ -0.7
XRN1-212ENST00000486211 METTL22Q9BUU2 404 aaPredicted RBP10.67□□□□□ -0.7
XRN1-212ENST00000486211 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
XRN1-212ENST00000486211 TMEM265A0A087WTH1 108 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 INPP5BP32019 993 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 KCNJ4P48050 445 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 FOSBP53539 338 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 MAP3K12Q12852 859 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
XRN1-212ENST00000486211 OGDHLQ9ULD0 1010 aa10.66□□□□□ -0.7
XRN1-212ENST00000486211 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
XRN1-212ENST00000486211 SYNGAP1Q96PV0 1343 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 TNPO2O14787 897 aaKnown RBP10.65□□□□□ -0.7
XRN1-212ENST00000486211 TAF5LO75529 589 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 COL6A1P12109 1028 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 ITGA6P23229 1130 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 PTPREP23469 700 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 CACNB3P54284 484 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 DUSP27Q5VZP5 1158 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 ZNF804AQ7Z570 1209 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 SLC4A5Q9BY07 1137 aa10.65□□□□□ -0.7
XRN1-212ENST00000486211 TTYH1Q9H313 450 aaPredicted RBP10.65□□□□□ -0.7
XRN1-212ENST00000486211 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.71
XRN1-212ENST00000486211 TMPOP42166 694 aaKnown RBP10.64□□□□□ -0.71
XRN1-212ENST00000486211 CRKP46108 304 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 TRIM32Q13049 653 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 LRRC26Q2I0M4 334 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 MFSD14BQ5SR56 506 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 USP38Q8NB14 1042 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 MPHOSPH8Q99549 860 aa10.64□□□□□ -0.71
XRN1-212ENST00000486211 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
XRN1-212ENST00000486211 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
XRN1-212ENST00000486211 HMGCRP04035 888 aa10.63□□□□□ -0.71
XRN1-212ENST00000486211 GRIK5Q16478 980 aa10.63□□□□□ -0.71
XRN1-212ENST00000486211 FAM83AQ86UY5 434 aa10.63□□□□□ -0.71
XRN1-212ENST00000486211 PLA2G12BQ9BX93 195 aa10.63□□□□□ -0.71
XRN1-212ENST00000486211 ZNF341Q9BYN7 854 aa10.63□□□□□ -0.71
XRN1-212ENST00000486211 ZNF112Q9UJU3 913 aa10.63□□□□□ -0.71
XRN1-212ENST00000486211 H7C1W4 665 aa10.62□□□□□ -0.71
XRN1-212ENST00000486211 CSF1RP07333 972 aa10.62□□□□□ -0.71
XRN1-212ENST00000486211 FOSL2P15408 326 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms