RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SOX4Q06945 474 aaPredicted RBP9.58□□□□□ -0.88
RTN4-214ENST00000486085 ADGRE1Q14246 886 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 MBTPS1Q14703 1052 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 LRFN4Q6PJG9 635 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 ELMO3Q96BJ8 720 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 PLPPR2Q96GM1 343 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 SUGCTQ9HAC7 445 aa9.58□□□□□ -0.88
RTN4-214ENST00000486085 CRKP46108 304 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 ID3Q02535 119 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 APOBRQ0VD83 1088 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 GNL2Q13823 731 aaKnown RBP9.57□□□□□ -0.88
RTN4-214ENST00000486085 ZC3H12AQ5D1E8 599 aaKnown RBP9.57□□□□□ -0.88
RTN4-214ENST00000486085 WIPI1Q5MNZ9 446 aaPredicted RBP9.57□□□□□ -0.88
RTN4-214ENST00000486085 ANKRD34AQ69YU3 496 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 DYMQ7RTS9 669 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 NKD1Q969G9 470 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 GPRASP2Q96D09 838 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 TINF2Q9BSI4 451 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 AP4E1Q9UPM8 1137 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
RTN4-214ENST00000486085 TMPRSS2O15393 492 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 SART1O43290 800 aaKnown RBP9.56□□□□□ -0.88
RTN4-214ENST00000486085 ADH5P11766 374 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 CHRNA4P43681 627 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 RPL6Q02878 288 aaKnown RBP9.56□□□□□ -0.88
RTN4-214ENST00000486085 MPP2Q14168 576 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 SEZ6Q53EL9 994 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 HDXQ7Z353 690 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 C8orf37Q96NL8 207 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 PCDHGC5Q9Y5F6 944 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
RTN4-214ENST00000486085 C1QTNF9BB2RNN3 333 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 TIAF1O95411 115 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 GJA8P48165 433 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 RASSF7Q02833 373 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 KCNMA1Q12791 1236 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 CD163Q86VB7 1156 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 CEP41Q9BYV8 373 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 PICK1Q9NRD5 415 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 CRIM1Q9NZV1 1036 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 SNCAIPQ9Y6H5 919 aa9.55□□□□□ -0.88
RTN4-214ENST00000486085 GFRA2O00451 464 aa9.54□□□□□ -0.88
RTN4-214ENST00000486085 PREPP48147 710 aa9.54□□□□□ -0.88
RTN4-214ENST00000486085 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
RTN4-214ENST00000486085 PPM1JQ5JR12 505 aa9.54□□□□□ -0.88
RTN4-214ENST00000486085 TXNRD3Q86VQ6 643 aa9.54□□□□□ -0.88
RTN4-214ENST00000486085 UBL7Q96S82 380 aaPredicted RBP9.54□□□□□ -0.88
RTN4-214ENST00000486085 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
RTN4-214ENST00000486085 HIF3AQ9Y2N7 669 aa9.54□□□□□ -0.88
RTN4-214ENST00000486085 PRAMEF27A3QJZ7 478 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 MCM4P33991 863 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 Q6ZS46 218 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 CYFIP1Q7L576 1253 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 REC114Q7Z4M0 266 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 VPS37DQ86XT2 251 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 C2CD4AQ8NCU7 369 aaPredicted RBP9.53□□□□□ -0.88
RTN4-214ENST00000486085 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 FANCD2OSQ96PS1 177 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 LRRC3Q9BY71 257 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 DISC1Q9NRI5 854 aa9.53□□□□□ -0.88
RTN4-214ENST00000486085 GAS2O43903 313 aaKnown RBP9.52□□□□□ -0.89
RTN4-214ENST00000486085 GRIN3BO60391 1043 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 ASPAP45381 313 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 ERVK-24P63145 666 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 SLITRK4Q8IW52 837 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 RASGRP4Q8TDF6 673 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 ATXN3LQ9H3M9 355 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 GINM1Q9NU53 330 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 EFR3BQ9Y2G0 817 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 ACTL7BQ9Y614 415 aa9.52□□□□□ -0.89
RTN4-214ENST00000486085 DNAJA1P31689 397 aaKnown RBP9.51□□□□□ -0.89
RTN4-214ENST00000486085 GSK3AP49840 483 aa9.51□□□□□ -0.89
RTN4-214ENST00000486085 USP11P51784 963 aa9.51□□□□□ -0.89
RTN4-214ENST00000486085 POLR3KQ9Y2Y1 108 aaPredicted RBP9.51□□□□□ -0.89
RTN4-214ENST00000486085 RNGTTO60942 597 aaKnown RBP9.5□□□□□ -0.89
RTN4-214ENST00000486085 RING1Q06587 406 aa9.5□□□□□ -0.89
RTN4-214ENST00000486085 TTLL4Q14679 1199 aa9.5□□□□□ -0.89
RTN4-214ENST00000486085 FAM46AQ96IP4 442 aaKnown RBP9.5□□□□□ -0.89
RTN4-214ENST00000486085 SPATA32Q96LK8 384 aa9.5□□□□□ -0.89
RTN4-214ENST00000486085 PIDD1Q9HB75 910 aa9.5□□□□□ -0.89
RTN4-214ENST00000486085 FAM105AQ9NUU6 356 aa9.5□□□□□ -0.89
RTN4-214ENST00000486085 CORINQ9Y5Q5 1042 aa9.5□□□□□ -0.89
RTN4-214ENST00000486085 GDF11O95390 407 aa9.49□□□□□ -0.89
RTN4-214ENST00000486085 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
RTN4-214ENST00000486085 ATF4P18848 351 aaPredicted RBP9.49□□□□□ -0.89
RTN4-214ENST00000486085 ZNF165P49910 485 aa9.49□□□□□ -0.89
RTN4-214ENST00000486085 ETF1P62495 437 aaKnown RBP9.49□□□□□ -0.89
RTN4-214ENST00000486085 ARID5AQ03989 594 aa9.49□□□□□ -0.89
RTN4-214ENST00000486085 GK5Q6ZS86 529 aa9.49□□□□□ -0.89
RTN4-214ENST00000486085 DZIP1LQ8IYY4 767 aaKnown RBP9.49□□□□□ -0.89
RTN4-214ENST00000486085 RNF214Q8ND24 703 aa9.49□□□□□ -0.89
RTN4-214ENST00000486085 RAB6AP20340 208 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 GRK4P32298 578 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 GATA4P43694 442 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
RTN4-214ENST00000486085 CLCQ05315 142 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 CDPF1Q6NVV7 123 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 TMEM151AQ8N4L1 468 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms