RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 OVOS2A0A0G2JMS6 1433 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 UBR1Q8IWV7 1749 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 RFX7Q2KHR2 1363 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 NEMFO60524 1076 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 GDF11O95390 407 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 PTGS1P23219 599 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 GDF10P55107 478 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 CBX1P83916 185 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 KRT76Q01546 638 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 DNM1Q05193 864 aaKnown RBP5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 NCOA4Q13772 614 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 HSP90AB2PQ58FF8 381 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 RNFT1Q5M7Z0 435 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 HDGFL1Q5TGJ6 251 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 PPP1R42Q7Z4L9 355 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 TTC6Q86TZ1 520 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 DEPDC4Q8N2C3 294 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 CHMP4AQ9BY43 222 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 SCAND2PQ9GZW5 306 aaPredicted RBP5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 PDRG1Q9NUG6 133 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 FAM53CQ9NYF3 392 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 SERTAD1Q9UHV2 236 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 CTNNA3Q9UI47 895 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 DDX41Q9UJV9 622 aaKnown RBP5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 DYRK1BQ9Y463 629 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 CYP46A1Q9Y6A2 500 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 NPHP4O75161 1426 aaPredicted RBP5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 CEMIPQ8WUJ3 1361 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 TMEM2Q9UHN6 1383 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 MED23Q9ULK4 1368 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 PLEKHG1Q9ULL1 1385 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 ABCC6O95255 1503 aa5.53□□□□□ -1.52
SMARCC1-206ENST00000485737 PHRF1Q9P1Y6 1649 aaKnown RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ACEP12821 1306 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 NCAPD2Q15021 1401 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ANKARQ7Z5J8 1434 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 SPATA31C2B4DYI2 1134 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 GPR25O00155 361 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 HIP1O00291 1037 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 FOXO3O43524 673 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 U2AF2P26368 475 aaKnown RBP eCLIP5.52□□□□□ -1.536e-8■□□□□ 9.9
SMARCC1-206ENST00000485737 RBM6P78332 1123 aaKnown RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 NECTIN1Q15223 517 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ANKRD1Q15327 319 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 FOXD4L6Q3SYB3 417 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ZSCAN25Q6NSZ9 544 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 FOXR1Q6PIV2 292 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 FOXD4L3Q6VB84 417 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 PROSER2Q86WR7 435 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ERC1Q8IUD2 1116 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 CCDC83Q8IWF9 413 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ZNF397Q8NF99 534 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ZNF837Q96EG3 531 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 MRFAP1L1Q96HT8 127 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 JAKMIP1Q96N16 626 aaKnown RBP5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ARID3AQ99856 593 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 TNMDQ9H2S6 317 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 CBX8Q9HC52 389 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 ECHDC1Q9NTX5 307 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 NOD1Q9Y239 953 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 LMO7Q8WWI1 1683 aa5.52□□□□□ -1.53
SMARCC1-206ENST00000485737 GNAT3A8MTJ3 354 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 USP17L5A8MUK1 530 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 H7C1W4 665 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 KIF2AO00139 706 aaPredicted RBP5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 CTAGE5O15320 804 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 SURF6O75683 361 aaKnown RBP5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 INHAP05111 366 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 LIG1P18858 919 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 PSMA5P28066 241 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 KCNJ6P48051 423 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 SCNN1DP51172 638 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 DBN1Q16643 649 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 ME3Q16798 604 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 ANO6Q4KMQ2 910 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 C4orf17Q53FE4 359 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 CDC37L1Q7L3B6 337 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 CCDC186Q7Z3E2 898 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 TXNDC2Q86VQ3 553 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 TRIM22Q8IYM9 498 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 SPC24Q8NBT2 197 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 CCDC112Q8NEF3 446 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 KIF18AQ8NI77 898 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 ADAMTS19Q8TE59 1207 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 LEO1Q8WVC0 666 aaPredicted RBP5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 MAP4K1Q92918 833 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 GTPBP3Q969Y2 492 aaKnown RBP5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 EVI5LQ96CN4 794 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 SCARF2Q96GP6 870 aaPredicted RBP5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 FHDC1Q9C0D6 1143 aaPredicted RBP5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 IL1RAPL2Q9NP60 686 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 MIS18AQ9NYP9 233 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 PODXL2Q9NZ53 605 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 HMG20BQ9P0W2 317 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 TPCN1Q9ULQ1 816 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 HRH3Q9Y5N1 445 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms