RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 SLAIN1Q8ND83 568 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 HTATIP2Q9BUP3 242 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 RNF208Q9H0X6 261 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 ZHX2Q9Y6X8 837 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 PTPRFP10586 1907 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 ATRNL1Q5VV63 1379 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 GAKO14976 1311 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 ZBTB22O15209 634 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 GJB1P08034 283 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 PTPRAP18433 802 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 GADL1Q6ZQY3 521 aa17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
SMARCD3-211ENST00000485592 RFX7Q2KHR2 1363 aa17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 PHF20L1A8MW92 1017 aa17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 SPTY2D1Q68D10 685 aaPredicted RBP17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 ABCF2Q9UG63 623 aa17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 SLC45A1Q9Y2W3 748 aa17.05■□□□□ 0.32
SMARCD3-211ENST00000485592 PDS5AQ29RF7 1337 aaKnown RBP17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 ADORA1P30542 326 aa17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 PICALMQ13492 652 aa17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 SMCR8Q8TEV9 937 aaPredicted RBP17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 AFG3L2Q9Y4W6 797 aa17.04■□□□□ 0.32
SMARCD3-211ENST00000485592 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 CTNND1O60716 968 aaKnown RBP17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 BTDP43251 543 aa17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 GABRQQ9UN88 632 aa17.03■□□□□ 0.32
SMARCD3-211ENST00000485592 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 TNPO2O14787 897 aaKnown RBP17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 ADCY3O60266 1144 aa17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 MAP3K10Q02779 954 aa17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 SH3BP5LQ7L8J4 393 aa17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 U2AF1L4Q8WU68 220 aaKnown RBP17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 FAM163AQ96GL9 167 aaPredicted RBP17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
SMARCD3-211ENST00000485592 TRIM75PA6NK02 468 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 FLT3LGP49771 235 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 TIMM10P62072 90 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 UBE2Q1Q7Z7E8 422 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 UNC93B1Q9H1C4 597 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 AGTPBP1Q9UPW5 1226 aa17.01■□□□□ 0.31
SMARCD3-211ENST00000485592 A0A1B0GUL7 405 aa17■□□□□ 0.31
SMARCD3-211ENST00000485592 SGPL1O95470 568 aa17■□□□□ 0.31
SMARCD3-211ENST00000485592 CAPN2P17655 700 aa17■□□□□ 0.31
SMARCD3-211ENST00000485592 PXYLP1Q8TE99 480 aa17■□□□□ 0.31
SMARCD3-211ENST00000485592 COA7Q96BR5 231 aa17■□□□□ 0.31
SMARCD3-211ENST00000485592 MEIS3Q99687 375 aa17■□□□□ 0.31
SMARCD3-211ENST00000485592 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
SMARCD3-211ENST00000485592 ATAD5Q96QE3 1844 aa16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 INHAP05111 366 aa16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 MECOMQ03112 1051 aa16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 IRF5Q13568 498 aa16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
SMARCD3-211ENST00000485592 LOC285556D6RIA3 1793 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 GPR75-ASB3A0A0A6YYF3 556 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 TBC1D12O60347 775 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 LDHCP07864 332 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 GNAI3P08754 354 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 ELNP15502 786 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 GSTO1P78417 241 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 TFCP2Q12800 502 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 ANKRD13CQ8N6S4 541 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.98■□□□□ 0.31
SMARCD3-211ENST00000485592 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 TFRCP02786 760 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 RHBDL3P58872 404 aa16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 FAM110CQ1W6H9 321 aa16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 COL2A1P02458 1487 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-211ENST00000485592 EVI5O60447 810 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms