RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 MSMPQ1L6U9 139 aa5.24□□□□□ -1.57
SGIP1-211ENST00000484988 EAPPQ56P03 285 aaPredicted RBP5.24□□□□□ -1.57
SGIP1-211ENST00000484988 SCARA3Q6AZY7 606 aa5.24□□□□□ -1.57
SGIP1-211ENST00000484988 OGFOD3Q6PK18 319 aa5.24□□□□□ -1.57
SGIP1-211ENST00000484988 DUSP9Q99956 384 aaKnown RBP5.24□□□□□ -1.57
SGIP1-211ENST00000484988 CBX8Q9HC52 389 aa5.24□□□□□ -1.57
SGIP1-211ENST00000484988 DAGLAQ9Y4D2 1042 aa5.24□□□□□ -1.57
SGIP1-211ENST00000484988 SAMM50Q9Y512 469 aa5.24□□□□□ -1.57
SGIP1-211ENST00000484988 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 NEFMP07197 916 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 CELA3AP09093 270 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 EIF4BP23588 611 aaKnown RBP5.23□□□□□ -1.57
SGIP1-211ENST00000484988 CYP27A1Q02318 531 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 RING1Q06587 406 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 LRRC14Q15048 493 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 SV2BQ7L1I2 683 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 ZNF765Q7L2R6 523 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 SMYD4Q8IYR2 804 aaPredicted RBP5.23□□□□□ -1.57
SGIP1-211ENST00000484988 RNF214Q8ND24 703 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 PIDD1Q9HB75 910 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 LGR6Q9HBX8 967 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 CYP8B1Q9UNU6 501 aa5.23□□□□□ -1.57
SGIP1-211ENST00000484988 CYP26A1O43174 497 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 HCLS1P14317 486 aaPredicted RBP5.22□□□□□ -1.57
SGIP1-211ENST00000484988 DUSP27Q5VZP5 1158 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 PCNX4Q63HM2 1172 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 LLGL2Q6P1M3 1020 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 KRTAP1-3Q8IUG1 177 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 PARP2Q9UGN5 583 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 PCOLCE2Q9UKZ9 415 aa5.22□□□□□ -1.57
SGIP1-211ENST00000484988 WNT11O96014 354 aa5.21□□□□□ -1.58
SGIP1-211ENST00000484988 PRNPP04156 253 aa5.21□□□□□ -1.58
SGIP1-211ENST00000484988 GP2P55259 537 aaKnown RBP5.21□□□□□ -1.58
SGIP1-211ENST00000484988 DAB2P98082 770 aa5.21□□□□□ -1.58
SGIP1-211ENST00000484988 FBXO33Q7Z6M2 555 aa5.21□□□□□ -1.58
SGIP1-211ENST00000484988 ISL2Q96A47 359 aa5.21□□□□□ -1.58
SGIP1-211ENST00000484988 ACSBG1Q96GR2 724 aa5.21□□□□□ -1.58
SGIP1-211ENST00000484988 TTF2Q9UNY4 1162 aaKnown RBP5.21□□□□□ -1.58
SGIP1-211ENST00000484988 RNGTTO60942 597 aaKnown RBP5.2□□□□□ -1.58
SGIP1-211ENST00000484988 NTF4P34130 210 aa5.2□□□□□ -1.58
SGIP1-211ENST00000484988 PTPN11Q06124 597 aaPredicted RBP5.2□□□□□ -1.58
SGIP1-211ENST00000484988 CDK5R2Q13319 367 aa5.2□□□□□ -1.58
SGIP1-211ENST00000484988 CYP27C1Q4G0S4 372 aa5.2□□□□□ -1.58
SGIP1-211ENST00000484988 PPM1JQ5JR12 505 aa5.2□□□□□ -1.58
SGIP1-211ENST00000484988 NFXL1Q6ZNB6 911 aa5.2□□□□□ -1.58
SGIP1-211ENST00000484988 GZF1Q9H116 711 aaPredicted RBP5.2□□□□□ -1.58
SGIP1-211ENST00000484988 ZC3H7BQ9UGR2 993 aaKnown RBP5.2□□□□□ -1.58
SGIP1-211ENST00000484988 CSADQ9Y600 493 aa5.2□□□□□ -1.58
SGIP1-211ENST00000484988 OAS3Q9Y6K5 1087 aaKnown RBP5.2□□□□□ -1.58
SGIP1-211ENST00000484988 DCDC2CA8MYV0 355 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 ERCC3P19447 782 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 RPS26P62854 115 aaKnown RBP5.19□□□□□ -1.58
SGIP1-211ENST00000484988 TTBK2Q6IQ55 1244 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 TMC4Q7Z404 712 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 C12orf40Q86WS4 652 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.19□□□□□ -1.58
SGIP1-211ENST00000484988 GAL3ST3Q96A11 431 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 BSDC1Q9NW68 430 aaPredicted RBP5.19□□□□□ -1.58
SGIP1-211ENST00000484988 CCDC39Q9UFE4 941 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 PCDHA4Q9UN74 947 aa5.19□□□□□ -1.58
SGIP1-211ENST00000484988 FANCGO15287 622 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 CTSHP09668 335 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 FAM87AP0C7U9 286 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 TAGLNQ01995 201 aaKnown RBP5.18□□□□□ -1.58
SGIP1-211ENST00000484988 PSMD2Q13200 908 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 INPP5AQ14642 412 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 CCDC85BQ15834 202 aaPredicted RBP5.18□□□□□ -1.58
SGIP1-211ENST00000484988 CCDC27Q2M243 656 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 ZBTB37Q5TC79 503 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 LRFN4Q6PJG9 635 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 CYFIP1Q7L576 1253 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 FAM214BQ7L5A3 538 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 UBE3DQ7Z6J8 389 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 LRRC4CQ9HCJ2 640 aa5.18□□□□□ -1.58
SGIP1-211ENST00000484988 SSU72Q9NP77 194 aaKnown RBP5.18□□□□□ -1.58
SGIP1-211ENST00000484988 USP31Q70CQ4 1352 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 LEFTY1O75610 366 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 MEI1Q5TIA1 1274 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 AGMOQ6ZNB7 445 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 VSIG10LQ86VR7 867 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 DUSP23Q9BVJ7 150 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 SNCAIPQ9Y6H5 919 aa5.17□□□□□ -1.58
SGIP1-211ENST00000484988 COL17A1Q9UMD9 1497 aaPredicted RBP5.17□□□□□ -1.58
SGIP1-211ENST00000484988 LIG3P49916 1009 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 ST13P50502 369 aaKnown RBP5.16□□□□□ -1.58
SGIP1-211ENST00000484988 XPCQ01831 940 aaPredicted RBP5.16□□□□□ -1.58
SGIP1-211ENST00000484988 TAF1CQ15572 869 aaPredicted RBP5.16□□□□□ -1.58
SGIP1-211ENST00000484988 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.16□□□□□ -1.58
SGIP1-211ENST00000484988 TOP6BLQ8N6T0 577 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 ELMO3Q96BJ8 720 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 FAM161BQ96MY7 647 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 NOC4LQ9BVI4 516 aaKnown RBP5.16□□□□□ -1.58
SGIP1-211ENST00000484988 MKNK2Q9HBH9 465 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 PCDHB5Q9Y5E4 795 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 U3KQE9 123 aa5.16□□□□□ -1.58
SGIP1-211ENST00000484988 GFRA2O00451 464 aa5.15□□□□□ -1.59
SGIP1-211ENST00000484988 CDK8P49336 464 aa5.15□□□□□ -1.59
SGIP1-211ENST00000484988 MCTP1Q6DN14 999 aa5.15□□□□□ -1.59
SGIP1-211ENST00000484988 HDXQ7Z353 690 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms