RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 GSX1Q9H4S2 264 aaPredicted RBP6.13□□□□□ -1.43
VPS50-216ENST00000484954 ACSS3Q9H6R3 686 aa6.13□□□□□ -1.43
VPS50-216ENST00000484954 LRRC4CQ9HCJ2 640 aa6.13□□□□□ -1.43
VPS50-216ENST00000484954 PRKAG2Q9UGJ0 569 aa6.13□□□□□ -1.43
VPS50-216ENST00000484954 PCDHGC5Q9Y5F6 944 aa6.13□□□□□ -1.43
VPS50-216ENST00000484954 CARMIL2Q6F5E8 1435 aa6.13□□□□□ -1.43
VPS50-216ENST00000484954 ENC1O14682 589 aa6.12□□□□□ -1.43
VPS50-216ENST00000484954 LDHBP07195 334 aaKnown RBP6.12□□□□□ -1.43
VPS50-216ENST00000484954 ZNF865P0CJ78 1059 aaPredicted RBP6.12□□□□□ -1.43
VPS50-216ENST00000484954 XRCC5P13010 732 aaKnown RBP6.12□□□□□ -1.43
VPS50-216ENST00000484954 PDIA4P13667 645 aaKnown RBP6.12□□□□□ -1.43
VPS50-216ENST00000484954 ASPAP45381 313 aa6.12□□□□□ -1.43
VPS50-216ENST00000484954 CPSF6Q16630 551 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-216ENST00000484954 ALG1LQ6GMV1 187 aa6.12□□□□□ -1.43
VPS50-216ENST00000484954 KCNB2Q92953 911 aa6.12□□□□□ -1.43
VPS50-216ENST00000484954 NECAB3Q96P71 396 aaPredicted RBP6.12□□□□□ -1.43
VPS50-216ENST00000484954 LGR6Q9HBX8 967 aa6.12□□□□□ -1.43
VPS50-216ENST00000484954 PPP4R2Q9NY27 417 aa6.12□□□□□ -1.43
VPS50-216ENST00000484954 ANKRD33BA6NCL7 494 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 FARP2O94887 1054 aaPredicted RBP6.11□□□□□ -1.43
VPS50-216ENST00000484954 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 PLCL1Q15111 1095 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 PKN1Q16512 942 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 KIF4BQ2VIQ3 1234 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 HP1BP3Q5SSJ5 553 aaPredicted RBP6.11□□□□□ -1.43
VPS50-216ENST00000484954 ZNF574Q6ZN55 896 aaPredicted RBP6.11□□□□□ -1.43
VPS50-216ENST00000484954 GRIN3AQ8TCU5 1115 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 CRIM1Q9NZV1 1036 aa6.11□□□□□ -1.43
VPS50-216ENST00000484954 ZC3H7BQ9UGR2 993 aaKnown RBP6.11□□□□□ -1.43
VPS50-216ENST00000484954 PATL2C9JE40 543 aaKnown RBP6.1□□□□□ -1.43
VPS50-216ENST00000484954 CELA3AP09093 270 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 USP17L7P0C7H9 530 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 NME2P22392 152 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 ARNTP27540 789 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 GSTT1P30711 240 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 ATP2B2Q01814 1243 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 MAP1SQ66K74 1059 aaPredicted RBP6.1□□□□□ -1.43
VPS50-216ENST00000484954 SEZ6L2Q6UXD5 910 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 ZAR1Q86SH2 424 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 FANCD2OSQ96PS1 177 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 C12orf49Q9H741 205 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 ZFYVE1Q9HBF4 777 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 DISC1Q9NRI5 854 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 C1GALT1Q9NS00 363 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 DAGLAQ9Y4D2 1042 aa6.1□□□□□ -1.43
VPS50-216ENST00000484954 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.09□□□□□ -1.43
VPS50-216ENST00000484954 BMP6P22004 513 aa6.09□□□□□ -1.43
VPS50-216ENST00000484954 ZNF792Q3KQV3 632 aa6.09□□□□□ -1.43
VPS50-216ENST00000484954 DNAJC14Q6Y2X3 702 aaPredicted RBP6.09□□□□□ -1.43
VPS50-216ENST00000484954 KSR1Q8IVT5 923 aa6.09□□□□□ -1.43
VPS50-216ENST00000484954 GPBAR1Q8TDU6 330 aa6.09□□□□□ -1.43
VPS50-216ENST00000484954 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
VPS50-216ENST00000484954 SYNGAP1Q96PV0 1343 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 BIN1O00499 593 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 NEFMP07197 916 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 ID3Q02535 119 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 YIPF2Q9BWQ6 316 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 SRCIN1Q9C0H9 1055 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 CBX8Q9HC52 389 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 CACNA2D2Q9NY47 1150 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 SPG7Q9UQ90 795 aa6.08□□□□□ -1.44
VPS50-216ENST00000484954 HCLS1P14317 486 aaPredicted RBP6.07□□□□□ -1.44
VPS50-216ENST00000484954 CDK5R2Q13319 367 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 MAP7Q14244 749 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 TTLL4Q14679 1199 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 DUSP27Q5VZP5 1158 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 ZNF765Q7L2R6 523 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 NPAS4Q8IUM7 802 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 FAM168AQ92567 244 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 DUSP9Q99956 384 aaKnown RBP6.07□□□□□ -1.44
VPS50-216ENST00000484954 FAM8A1Q9UBU6 413 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 PPM1HQ9ULR3 514 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 SLC5A6Q9Y289 635 aa6.07□□□□□ -1.44
VPS50-216ENST00000484954 GIPC1O14908 333 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 PRPF40AO75400 957 aaKnown RBP6.06□□□□□ -1.44
VPS50-216ENST00000484954 SLFN14P0C7P3 912 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 GNA15P30679 374 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 TAGLNQ01995 201 aaKnown RBP6.06□□□□□ -1.44
VPS50-216ENST00000484954 PTPN11Q06124 597 aaPredicted RBP6.06□□□□□ -1.44
VPS50-216ENST00000484954 ZC3H12AQ5D1E8 599 aaKnown RBP6.06□□□□□ -1.44
VPS50-216ENST00000484954 SPRED2Q7Z698 418 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 UBE3DQ7Z6J8 389 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 BCL7CQ8WUZ0 217 aaPredicted RBP6.06□□□□□ -1.44
VPS50-216ENST00000484954 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 CSADQ9Y600 493 aa6.06□□□□□ -1.44
VPS50-216ENST00000484954 NTF4P34130 210 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 BNIP3Q12983 259 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 PCNX4Q63HM2 1172 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 WFDC3Q8IUB2 231 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 SMYD4Q8IYR2 804 aaPredicted RBP6.05□□□□□ -1.44
VPS50-216ENST00000484954 ANKRD24Q8TF21 1146 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 ISL2Q96A47 359 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 SLC38A3Q99624 504 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 CEP44Q9C0F1 390 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 ATXN3LQ9H3M9 355 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 PIDD1Q9HB75 910 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 TTF2Q9UNY4 1162 aaKnown RBP6.05□□□□□ -1.44
VPS50-216ENST00000484954 U3KQE9 123 aa6.05□□□□□ -1.44
VPS50-216ENST00000484954 DCDC2CA8MYV0 355 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms