RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 EIF4BP23588 611 aaKnown RBP7.6□□□□□ -1.19
SMC4-215ENST00000484799 CDK5R2Q13319 367 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 LLGL2Q6P1M3 1020 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 AGBL5Q8NDL9 886 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 FLCNQ8NFG4 579 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 GPBAR1Q8TDU6 330 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 ELMO3Q96BJ8 720 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 OSBPL7Q9BZF2 842 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 C12orf49Q9H741 205 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 CCDC39Q9UFE4 941 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 PCDHA4Q9UN74 947 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 CYP8B1Q9UNU6 501 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
SMC4-215ENST00000484799 CSADQ9Y600 493 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 DYNC1LI2O43237 492 aaPredicted RBP7.59□□□□□ -1.19
SMC4-215ENST00000484799 ERVK-24P63145 666 aa7.59□□□□□ -1.19
SMC4-215ENST00000484799 PDZD3Q86UT5 571 aa7.59□□□□□ -1.19
SMC4-215ENST00000484799 RNF214Q8ND24 703 aa7.59□□□□□ -1.19
SMC4-215ENST00000484799 SLC5A6Q9Y289 635 aa7.59□□□□□ -1.19
SMC4-215ENST00000484799 COL17A1Q9UMD9 1497 aaPredicted RBP7.59□□□□□ -1.19
SMC4-215ENST00000484799 USP17L7P0C7H9 530 aa7.58□□□□□ -1.2
SMC4-215ENST00000484799 EAPPQ56P03 285 aaPredicted RBP7.58□□□□□ -1.2
SMC4-215ENST00000484799 ZC3H12AQ5D1E8 599 aaKnown RBP7.58□□□□□ -1.2
SMC4-215ENST00000484799 STK11IPQ8N1F8 1099 aa7.58□□□□□ -1.2
SMC4-215ENST00000484799 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
SMC4-215ENST00000484799 STK35Q8TDR2 534 aa7.58□□□□□ -1.2
SMC4-215ENST00000484799 GATA6Q92908 595 aa7.58□□□□□ -1.2
SMC4-215ENST00000484799 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
SMC4-215ENST00000484799 ZC3H7BQ9UGR2 993 aaKnown RBP7.58□□□□□ -1.2
SMC4-215ENST00000484799 DCDC2CA8MYV0 355 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 TRIM37O94972 964 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 P4HBP07237 508 aaKnown RBP7.57□□□□□ -1.2
SMC4-215ENST00000484799 TXKP42681 527 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 MSMPQ1L6U9 139 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 SEZ6L2Q6UXD5 910 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 KCT2Q8NC54 265 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
SMC4-215ENST00000484799 ADAMTS4O75173 837 aa7.56□□□□□ -1.2
SMC4-215ENST00000484799 PRNPP04156 253 aa7.56□□□□□ -1.2
SMC4-215ENST00000484799 BMP6P22004 513 aa7.56□□□□□ -1.2
SMC4-215ENST00000484799 SV2BQ7L1I2 683 aa7.56□□□□□ -1.2
SMC4-215ENST00000484799 C12orf40Q86WS4 652 aa7.56□□□□□ -1.2
SMC4-215ENST00000484799 ISL2Q96A47 359 aa7.56□□□□□ -1.2
SMC4-215ENST00000484799 ANKRD33BA6NCL7 494 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 ENC1O14682 589 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
SMC4-215ENST00000484799 GNA15P30679 374 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 XPCQ01831 940 aaPredicted RBP7.55□□□□□ -1.2
SMC4-215ENST00000484799 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 SCARA3Q6AZY7 606 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 HDXQ7Z353 690 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 TOP6BLQ8N6T0 577 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 MISP3Q96FF7 219 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 GTF2IRD1Q9UHL9 959 aa7.55□□□□□ -1.2
SMC4-215ENST00000484799 FANCGO15287 622 aa7.54□□□□□ -1.2
SMC4-215ENST00000484799 PAGE1O75459 146 aa7.54□□□□□ -1.2
SMC4-215ENST00000484799 ZNF252P-AS1Q0IIN9 211 aa7.54□□□□□ -1.2
SMC4-215ENST00000484799 CCDC85BQ15834 202 aaPredicted RBP7.54□□□□□ -1.2
SMC4-215ENST00000484799 PCNX4Q63HM2 1172 aa7.54□□□□□ -1.2
SMC4-215ENST00000484799 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMC4-215ENST00000484799 ABI1Q8IZP0 508 aa7.54□□□□□ -1.2
SMC4-215ENST00000484799 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
SMC4-215ENST00000484799 PLCL1Q15111 1095 aa7.53□□□□□ -1.2
SMC4-215ENST00000484799 MPRIPQ6WCQ1 1025 aa7.53□□□□□ -1.2
SMC4-215ENST00000484799 DUSP23Q9BVJ7 150 aa7.53□□□□□ -1.2
SMC4-215ENST00000484799 RNF114Q9Y508 228 aa7.53□□□□□ -1.2
SMC4-215ENST00000484799 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
SMC4-215ENST00000484799 AK5Q9Y6K8 562 aa7.53□□□□□ -1.2
SMC4-215ENST00000484799 TMEM265A0A087WTH1 108 aa7.52□□□□□ -1.21
SMC4-215ENST00000484799 PRAMEF27A3QJZ7 478 aa7.52□□□□□ -1.21
SMC4-215ENST00000484799 ITGAEP38570 1179 aa7.52□□□□□ -1.21
SMC4-215ENST00000484799 COL19A1Q14993 1142 aa7.52□□□□□ -1.21
SMC4-215ENST00000484799 TTBK2Q6IQ55 1244 aa7.52□□□□□ -1.21
SMC4-215ENST00000484799 FAM181AQ8N9Y4 354 aa7.52□□□□□ -1.21
SMC4-215ENST00000484799 DUSP9Q99956 384 aaKnown RBP7.52□□□□□ -1.21
SMC4-215ENST00000484799 GNAT3A8MTJ3 354 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 BIN1O00499 593 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 LEFTY1O75610 366 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 NEFMP07197 916 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 CELA3AP09093 270 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 ETF1P62495 437 aaKnown RBP7.51□□□□□ -1.21
SMC4-215ENST00000484799 BNIP3Q12983 259 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 PSMD2Q13200 908 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 IFI16Q16666 785 aaKnown RBP7.51□□□□□ -1.21
SMC4-215ENST00000484799 ANKRD24Q8TF21 1146 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 BCL7CQ8WUZ0 217 aaPredicted RBP7.51□□□□□ -1.21
SMC4-215ENST00000484799 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 ADGRE2Q9UHX3 823 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 VAV3Q9UKW4 847 aa7.51□□□□□ -1.21
SMC4-215ENST00000484799 RLBP1P12271 317 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 ITIH2P19823 946 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 AOC3Q16853 763 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 PLD6Q8N2A8 252 aaKnown RBP7.5□□□□□ -1.21
SMC4-215ENST00000484799 ASIC4Q96FT7 647 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 HRASLS5Q96KN8 279 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 BCL11AQ9H165 835 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 MKNK2Q9HBH9 465 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 SNCAIPQ9Y6H5 919 aa7.5□□□□□ -1.21
SMC4-215ENST00000484799 PRKCQQ04759 706 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms