RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 CCDC97Q96F63 343 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-206ENST00000484520 CORO1BQ9BR76 489 aa6.46□□□□□ -1.38
SPTA1-206ENST00000484520 TRIM56Q9BRZ2 755 aaKnown RBP6.46□□□□□ -1.38
SPTA1-206ENST00000484520 GSX1Q9H4S2 264 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-206ENST00000484520 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
SPTA1-206ENST00000484520 CCDC87Q9NVE4 849 aa6.46□□□□□ -1.38
SPTA1-206ENST00000484520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-206ENST00000484520 CFAP43Q8NDM7 1665 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 CHD1O14646 1710 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 PTPRGP23470 1445 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 BIN1O00499 593 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 SSFA2P28290 1259 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 ZNF124Q15973 351 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 GJD3Q8N144 294 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 EHBP1L1Q8N3D4 1523 aa6.45□□□□□ -1.38
SPTA1-206ENST00000484520 MTUS2Q5JR59 1369 aa6.44□□□□□ -1.38
SPTA1-206ENST00000484520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
SPTA1-206ENST00000484520 AOC2O75106 756 aa6.44□□□□□ -1.38
SPTA1-206ENST00000484520 GALNT12Q8IXK2 581 aa6.44□□□□□ -1.38
SPTA1-206ENST00000484520 EPRSP07814 1512 aaKnown RBP6.44□□□□□ -1.38
SPTA1-206ENST00000484520 UHRF1BP1LA0JNW5 1464 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 B3GALT4O96024 378 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 PDE3AQ14432 1141 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 CYP27C1Q4G0S4 372 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 PLD6Q8N2A8 252 aaKnown RBP6.43□□□□□ -1.38
SPTA1-206ENST00000484520 DDX54Q8TDD1 881 aaKnown RBP6.43□□□□□ -1.38
SPTA1-206ENST00000484520 WDR18Q9BV38 432 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 RAPGEF6Q8TEU7 1601 aa6.43□□□□□ -1.38
SPTA1-206ENST00000484520 UACAQ9BZF9 1416 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 RRBP1Q9P2E9 1410 aaKnown RBP6.42□□□□□ -1.38
SPTA1-206ENST00000484520 NUP153P49790 1475 aaKnown RBP6.42□□□□□ -1.38
SPTA1-206ENST00000484520 CD8BP10966 210 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 FKBP4Q02790 459 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPTA1-206ENST00000484520 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 MISP3Q96FF7 219 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 PCGF6Q9BYE7 350 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 ANO2Q9NQ90 1003 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 SERPINA10Q9UK55 444 aa6.42□□□□□ -1.38
SPTA1-206ENST00000484520 ABCA8O94911 1581 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 FAM87AP0C7U9 286 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 FUT4P22083 530 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 CDK5R2Q13319 367 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 SF3B2Q13435 895 aaKnown RBP6.41□□□□□ -1.38
SPTA1-206ENST00000484520 USPL1Q5W0Q7 1092 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
SPTA1-206ENST00000484520 FAM181AQ8N9Y4 354 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 GLIS3Q8NEA6 775 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 NETO1Q8TDF5 533 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 FAM168AQ92567 244 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 ZNF576Q9H609 170 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 RC3H2Q9HBD1 1191 aaKnown RBP6.41□□□□□ -1.38
SPTA1-206ENST00000484520 CCNB3Q8WWL7 1395 aa6.41□□□□□ -1.38
SPTA1-206ENST00000484520 ABCC2Q92887 1545 aa6.4□□□□□ -1.38
SPTA1-206ENST00000484520 DBX1A6NMT0 343 aa6.4□□□□□ -1.38
SPTA1-206ENST00000484520 TMPRSS2O15393 492 aa6.4□□□□□ -1.38
SPTA1-206ENST00000484520 FARP2O94887 1054 aaPredicted RBP6.4□□□□□ -1.38
SPTA1-206ENST00000484520 ABL1P00519 1130 aa6.4□□□□□ -1.38
SPTA1-206ENST00000484520 RNASE1P07998 156 aaKnown RBP6.4□□□□□ -1.38
SPTA1-206ENST00000484520 CD96P40200 585 aa6.4□□□□□ -1.38
SPTA1-206ENST00000484520 KIAA0319Q5VV43 1072 aa6.4□□□□□ -1.38
SPTA1-206ENST00000484520 MBNL3Q9NUK0 354 aaKnown RBP6.4□□□□□ -1.38
SPTA1-206ENST00000484520 TROQ12816 1431 aaPredicted RBP6.4□□□□□ -1.39
SPTA1-206ENST00000484520 MIA2Q96PC5 1412 aa6.4□□□□□ -1.39
SPTA1-206ENST00000484520 PLB1Q6P1J6 1458 aa6.4□□□□□ -1.39
SPTA1-206ENST00000484520 PLEKHD1A6NEE1 506 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 LIG1P18858 919 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 ZNF211Q13398 564 aaPredicted RBP6.39□□□□□ -1.39
SPTA1-206ENST00000484520 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
SPTA1-206ENST00000484520 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 EHD4Q9H223 541 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 ADAMTS6Q9UKP5 1117 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 MTMR7Q9Y216 660 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 U3KQE9 123 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 SYNGAP1Q96PV0 1343 aa6.39□□□□□ -1.39
SPTA1-206ENST00000484520 ITPKAP23677 461 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 AP3B2Q13367 1082 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 FBLN7Q53RD9 439 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 PHLDB3Q6NSJ2 640 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 PI4K2BQ8TCG2 481 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 ZC3H12CQ9C0D7 883 aaKnown RBP6.38□□□□□ -1.39
SPTA1-206ENST00000484520 PIDD1Q9HB75 910 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 CRIM1Q9NZV1 1036 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 VAV3Q9UKW4 847 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 MYOM3Q5VTT5 1437 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 NCOA2Q15596 1464 aa6.38□□□□□ -1.39
SPTA1-206ENST00000484520 SUPT6HQ7KZ85 1726 aaKnown RBP6.38□□□□□ -1.39
SPTA1-206ENST00000484520 PRKCQQ04759 706 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 PKN1Q16512 942 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 SPOCD1Q6ZMY3 1216 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 KSR1Q8IVT5 923 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 LRRN4CLQ8ND94 238 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 TMEM40Q8WWA1 233 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 FANCD2OSQ96PS1 177 aa6.37□□□□□ -1.39
SPTA1-206ENST00000484520 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
SPTA1-206ENST00000484520 KDM5BQ9UGL1 1544 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 ATP10BO94823 1461 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 FGD6Q6ZV73 1430 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms