RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 GOLGA8FQ08AF8 430 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 GOLGA8DPQ0D2H9 430 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 UBE3BQ7Z3V4 1068 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 PNKPQ96T60 521 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 SDF4Q9BRK5 362 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 NCOA5Q9HCD5 579 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 ABCB6Q9NP58 842 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 L1RE1Q9UN81 338 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 NEBLO76041 1014 aa13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 PAX7P23759 505 aa13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 FOSBP53539 338 aa13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 JMYQ8N9B5 988 aa13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 FAM71BQ8TC56 605 aa13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 CALR3Q96L12 384 aaKnown RBP13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 ANKZF1Q9H8Y5 726 aa13.21□□□□□ -0.3
SEC61A1-205ENST00000483956 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 NDUFA8P51970 172 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 C11orf91Q3C1V1 193 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 DPCR1Q3MIW9 517 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 ESCO1Q5FWF5 840 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 HNRNPLLQ8WVV9 542 aaKnown RBP13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 FAM107BQ9H098 131 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 ELF1P32519 619 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 SLC39A6Q13433 755 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 FAM169AQ9Y6X4 670 aa13.2□□□□□ -0.3
SEC61A1-205ENST00000483956 INHBEP58166 350 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 GPTP24298 496 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 CCT5P48643 541 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 NLRP12P59046 1061 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 CASP8Q14790 479 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 MAST3O60307 1309 aa13.19□□□□□ -0.3
SEC61A1-205ENST00000483956 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 STK38Q15208 465 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 N4BP2L2Q92802 583 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 PPP2R2CQ9Y2T4 447 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 NWD2Q9ULI1 1742 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 GLI3P10071 1580 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 MST1RQ04912 1400 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 A0A087WZG4 1122 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 IKBKBO14920 756 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 NCAPHQ15003 741 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 RNF113AO15541 343 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 RNF40O75150 1001 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 USP5P45974 858 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 NEDD9Q14511 834 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 PTPN21Q16825 1174 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 CD248Q9HCU0 757 aa13.18□□□□□ -0.3
SEC61A1-205ENST00000483956 KIF3CO14782 793 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 SPTLC2O15270 562 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 AFAP1L1Q8TED9 768 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 TJP1Q07157 1748 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 H0YHG0 523 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 PHKG2P15735 406 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEC61A1-205ENST00000483956 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 LRRIQ3A6PVS8 624 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 ERLIN1O75477 346 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 FOXO4P98177 505 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 PLBD2Q8NHP8 589 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 C8orf76Q96K31 380 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 RAB21Q9UL25 225 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 CMA1P23946 247 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 INPP5BP32019 993 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms