RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 TSKSQ9UJT2 592 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 S100BP04271 92 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-207ENST00000483888 ELF1P32519 619 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 LMNB2Q03252 620 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
COL12A1-207ENST00000483888 KRT75O95678 551 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 CUL3Q13618 768 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 PPP2R2CQ9Y2T4 447 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 SYNRGQ9UMZ2 1314 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 RMDN2Q96LZ7 410 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 DRC3Q9H069 523 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 TXLNGQ9NUQ3 528 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 HS2ST1Q7LGA3 356 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 ZNF280CQ8ND82 737 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 FAM167BQ9BTA0 163 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 OSBPL1AQ9BXW6 950 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 XPO4Q9C0E2 1151 aaKnown RBP11.39□□□□□ -0.59
COL12A1-207ENST00000483888 ADKP55263 362 aaKnown RBP11.39□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC14Q49A88 953 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 ANGPTL2Q9UKU9 493 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 HDAC9Q9UKV0 1011 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 FLOT1O75955 427 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 GEN1Q17RS7 908 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 SSX2IPQ9Y2D8 614 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 TAF7Q15545 349 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-207ENST00000483888 STXBP4Q6ZWJ1 553 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC13Q8IYE1 715 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 MORC2Q9Y6X9 1032 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-207ENST00000483888 BMP15O95972 392 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 TCEANC2Q96MN5 208 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 GPT2Q8TD30 523 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 PHLPP2Q6ZVD8 1323 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 SRGAP1Q7Z6B7 1085 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 SRLQ86TD4 932 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 UBL4BQ8N7F7 174 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 MYOM3Q5VTT5 1437 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 TRIM66O15016 1216 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 MYL6BP14649 208 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 ASIC1P78348 528 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 APBA1Q02410 837 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 DESI2Q9BSY9 194 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 NLRP12P59046 1061 aa11.38□□□□□ -0.59
COL12A1-207ENST00000483888 ITIH3Q06033 890 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ATL3Q6DD88 541 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC8Q9H0W5 538 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 KLC4Q9NSK0 619 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 PARP2Q9UGN5 583 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ERBB4Q15303 1308 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 PABPN1LA6NDY0 278 aaKnown RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 NLRP7Q8WX94 980 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 USP26Q9BXU7 913 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 SUPT6HQ7KZ85 1726 aaKnown RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 EIF4E1BA6NMX2 242 aaKnown RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 TBC1D8O95759 1140 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 NBPF7P0C2Y1 421 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 CSRNP2Q9H175 543 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 SYF2O95926 243 aaKnown RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ANKRD20A4Q4UJ75 823 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ANKRD20A8PQ5CZ79 823 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ANKRD20A2Q5SQ80 823 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ANKRD20A1Q5TYW2 823 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 SEPT10Q9P0V9 454 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ARHGEF9O43307 516 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 CEP126Q9P2H0 1117 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC151A5D8V7 595 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 TMED10P49755 219 aaKnown RBP11.37□□□□□ -0.59
COL12A1-207ENST00000483888 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
COL12A1-207ENST00000483888 IQCDQ96DY2 449 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 INTS9Q9NV88 658 aaKnown RBP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 TNIP1Q15025 636 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 RRP36Q96EU6 259 aaKnown RBP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 NRBF2Q96F24 287 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 SPZ1Q9BXG8 430 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 NEK2P51955 445 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 ENAHQ8N8S7 591 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 PHBP35232 272 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 TTC21AQ8NDW8 1320 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 CRCPO75575 148 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 LMNAP02545 664 aaKnown RBP11.36□□□□□ -0.59
COL12A1-207ENST00000483888 SULT6B1Q6IMI4 303 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 EFCAB2Q5VUJ9 269 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 NCOA7Q8NI08 942 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 KLF18A0A0U1RQI7 1052 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 AFAP1L2Q8N4X5 818 aa11.36□□□□□ -0.59
COL12A1-207ENST00000483888 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 IFIT1P09914 478 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms