RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 GNB5O14775 395 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 IMPDH2P12268 514 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 CDK8P49336 464 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
MCF2-207ENST00000483690 LRFN4Q6PJG9 635 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 WDR89Q96FK6 387 aaPredicted RBP11.49□□□□□ -0.57
MCF2-207ENST00000483690 PLVAPQ9BX97 442 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 RAD18Q9NS91 495 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 POLR3KQ9Y2Y1 108 aaPredicted RBP11.49□□□□□ -0.57
MCF2-207ENST00000483690 PCDHB14Q9Y5E9 798 aa11.49□□□□□ -0.57
MCF2-207ENST00000483690 DLL1O00548 723 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 AOC2O75106 756 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 DLGAP3O95886 979 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 ETFBP38117 255 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 SNRPNP63162 240 aaKnown RBP11.48□□□□□ -0.57
MCF2-207ENST00000483690 CLCQ05315 142 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 INPP5AQ14642 412 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 LINC00114Q6XXX2 140 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 MKL2Q9ULH7 1088 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 ZNRF3Q9ULT6 936 aa11.48□□□□□ -0.57
MCF2-207ENST00000483690 GFRA2O00451 464 aa11.47□□□□□ -0.57
MCF2-207ENST00000483690 ARHGEF15O94989 841 aa11.47□□□□□ -0.57
MCF2-207ENST00000483690 SELPP16109 830 aa11.47□□□□□ -0.57
MCF2-207ENST00000483690 TRIM28Q13263 835 aaKnown RBP11.47□□□□□ -0.57
MCF2-207ENST00000483690 EXOSC6Q5RKV6 272 aaKnown RBP11.47□□□□□ -0.57
MCF2-207ENST00000483690 SHDQ96IW2 340 aa11.47□□□□□ -0.57
MCF2-207ENST00000483690 ANKS3Q6ZW76 656 aa11.46□□□□□ -0.57
MCF2-207ENST00000483690 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.57
MCF2-207ENST00000483690 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 ATE1O95260 518 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 OR6P1Q8NGX9 317 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 PRKAG3Q9UGI9 489 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 R3HCC1Q9Y3T6 440 aaKnown RBP11.45□□□□□ -0.58
MCF2-207ENST00000483690 TACC3Q9Y6A5 838 aa11.45□□□□□ -0.58
MCF2-207ENST00000483690 SYNGAP1Q96PV0 1343 aa11.44□□□□□ -0.58
MCF2-207ENST00000483690 GIPRP48546 466 aa11.44□□□□□ -0.58
MCF2-207ENST00000483690 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
MCF2-207ENST00000483690 TNNI3KQ59H18 835 aa11.44□□□□□ -0.58
MCF2-207ENST00000483690 ZC3H12AQ5D1E8 599 aaKnown RBP11.44□□□□□ -0.58
MCF2-207ENST00000483690 ACAD11Q709F0 780 aa11.44□□□□□ -0.58
MCF2-207ENST00000483690 CYFIP1Q7L576 1253 aa11.44□□□□□ -0.58
MCF2-207ENST00000483690 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 PRAMEF27A3QJZ7 478 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 HTR3BO95264 441 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 WISP1O95388 367 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 ELNP15502 786 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 ID3Q02535 119 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 PDE4BQ07343 736 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 MLECQ14165 292 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 PRRT3Q5FWE3 981 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 IGF2-ASQ6U949 168 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 C12orf40Q86WS4 652 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 TRIM55Q9BYV6 548 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 PICK1Q9NRD5 415 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 NOP53Q9NZM5 478 aaKnown RBP11.43□□□□□ -0.58
MCF2-207ENST00000483690 PCDHGC5Q9Y5F6 944 aa11.43□□□□□ -0.58
MCF2-207ENST00000483690 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 NUTM2GQ5VZR2 741 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 PODNQ7Z5L7 613 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 RBBP8NLQ8NC74 664 aaPredicted RBP11.42□□□□□ -0.58
MCF2-207ENST00000483690 TMPRSS13Q9BYE2 586 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 MRPL18Q9H0U6 180 aaKnown RBP11.42□□□□□ -0.58
MCF2-207ENST00000483690 RNF208Q9H0X6 261 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 OSBPL2Q9H1P3 480 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 ZSWIM4Q9H7M6 989 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 CORINQ9Y5Q5 1042 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 CSADQ9Y600 493 aa11.42□□□□□ -0.58
MCF2-207ENST00000483690 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
MCF2-207ENST00000483690 SMAD7O15105 426 aaKnown RBP11.41□□□□□ -0.58
MCF2-207ENST00000483690 ERVK-24P63145 666 aa11.41□□□□□ -0.58
MCF2-207ENST00000483690 LRRFIP1Q32MZ4 808 aaKnown RBP11.41□□□□□ -0.58
MCF2-207ENST00000483690 KIAA1211Q6ZU35 1233 aa11.41□□□□□ -0.58
MCF2-207ENST00000483690 LSRQ86X29 649 aaPredicted RBP11.41□□□□□ -0.58
MCF2-207ENST00000483690 HNRNPLLQ8WVV9 542 aaKnown RBP11.41□□□□□ -0.58
MCF2-207ENST00000483690 CYP4F12Q9HCS2 524 aa11.41□□□□□ -0.58
MCF2-207ENST00000483690 WIPF1O43516 503 aa11.4□□□□□ -0.58
MCF2-207ENST00000483690 PLCG1P19174 1290 aa11.4□□□□□ -0.58
MCF2-207ENST00000483690 REV1Q9UBZ9 1251 aa11.4□□□□□ -0.58
MCF2-207ENST00000483690 HIF3AQ9Y2N7 669 aa11.4□□□□□ -0.58
MCF2-207ENST00000483690 U2SURPO15042 1029 aaKnown RBP11.39□□□□□ -0.59
MCF2-207ENST00000483690 TMPRSS2O15393 492 aa11.39□□□□□ -0.59
MCF2-207ENST00000483690 ETF1P62495 437 aaKnown RBP11.39□□□□□ -0.59
MCF2-207ENST00000483690 FAM169BQ8N8A8 192 aa11.39□□□□□ -0.59
MCF2-207ENST00000483690 PPP1R9AQ9ULJ8 1098 aa11.39□□□□□ -0.59
MCF2-207ENST00000483690 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
MCF2-207ENST00000483690 KLF4O43474 513 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 PGRP06401 933 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 GRK4P32298 578 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 RAB33AQ14088 237 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 PPM1JQ5JR12 505 aa11.38□□□□□ -0.59
MCF2-207ENST00000483690 NOP9Q86U38 636 aaKnown RBP11.38□□□□□ -0.59
MCF2-207ENST00000483690 BEND7Q8N7W2 519 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms