RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 EVCP57679 992 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 APOBEC3HQ6NTF7 200 aaKnown RBP19.18■□□□□ 0.66
RFTN1-209ENST00000483671 MFSD6Q6ZSS7 791 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 TEX11Q8IYF3 940 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 FOCADQ5VW36 1801 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 F8W031 263 aaPredicted RBP19.17■□□□□ 0.66
RFTN1-209ENST00000483671 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 Q6ZUG5 572 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 KIAA0825Q8IV33 1275 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 AGBL3Q8NEM8 1001 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 JDP2Q8WYK2 163 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 TACC3Q9Y6A5 838 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 NEDD4P46934 1319 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 CDK5RAP2Q96SN8 1893 aa19.17■□□□□ 0.66
RFTN1-209ENST00000483671 BAZ2AQ9UIF9 1905 aaKnown RBP19.16■□□□□ 0.66
RFTN1-209ENST00000483671 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 PSMD14O00487 310 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
RFTN1-209ENST00000483671 SCNN1DP51172 638 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 ANTXR2P58335 489 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 C12orf60Q5U649 245 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 TCEANC2Q96MN5 208 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 CWC22Q9HCG8 908 aaKnown RBP19.16■□□□□ 0.66
RFTN1-209ENST00000483671 TPCN1Q9ULQ1 816 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
RFTN1-209ENST00000483671 FLT1P17948 1338 aa19.16■□□□□ 0.66
RFTN1-209ENST00000483671 MINDY4BA8MYZ0 360 aa19.15■□□□□ 0.66
RFTN1-209ENST00000483671 PRC1O43663 620 aa19.15■□□□□ 0.66
RFTN1-209ENST00000483671 ORC4O43929 436 aa19.15■□□□□ 0.66
RFTN1-209ENST00000483671 HSP90AA1P07900 732 aaKnown RBP19.15■□□□□ 0.66
RFTN1-209ENST00000483671 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
RFTN1-209ENST00000483671 CXCL9Q07325 125 aa19.15■□□□□ 0.66
RFTN1-209ENST00000483671 TGFBRAP1Q8WUH2 860 aa19.15■□□□□ 0.66
RFTN1-209ENST00000483671 MCM9Q9NXL9 1143 aa19.15■□□□□ 0.66
RFTN1-209ENST00000483671 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.15■□□□□ 0.66
RFTN1-209ENST00000483671 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
RFTN1-209ENST00000483671 RAD17O75943 681 aa19.14■□□□□ 0.65
RFTN1-209ENST00000483671 CDC42EP5Q6NZY7 148 aa19.14■□□□□ 0.65
RFTN1-209ENST00000483671 AMOTL1Q8IY63 956 aa19.14■□□□□ 0.65
RFTN1-209ENST00000483671 TMEM87BQ96K49 555 aa19.14■□□□□ 0.65
RFTN1-209ENST00000483671 SYT17Q9BSW7 474 aa19.14■□□□□ 0.65
RFTN1-209ENST00000483671 B4E1Z4 1266 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 FZD9O00144 591 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 TNIP1Q15025 636 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 ME3Q16798 604 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 CIAPIN1Q6FI81 312 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 NOL8Q76FK4 1167 aaKnown RBP19.13■□□□□ 0.65
RFTN1-209ENST00000483671 BRF1Q92994 677 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 IDI2Q9BXS1 227 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 USP40Q9NVE5 1235 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
RFTN1-209ENST00000483671 CYP2D7A0A087X1C5 515 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 LARGE1O95461 756 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 USP17L8P0C7I0 530 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 RPS12P25398 132 aaKnown RBP19.12■□□□□ 0.65
RFTN1-209ENST00000483671 PRELPP51888 382 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 FGD1P98174 961 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 RASSF7Q02833 373 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 CYB5R4Q7L1T6 521 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 MAPKAPK5Q8IW41 473 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 MTMR14Q8NCE2 650 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 ESR2Q92731 530 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 ZNF274Q96GC6 653 aaPredicted RBP19.12■□□□□ 0.65
RFTN1-209ENST00000483671 SLKQ9H2G2 1235 aaPredicted RBP19.12■□□□□ 0.65
RFTN1-209ENST00000483671 ZSWIM5Q9P217 1185 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 HDAC9Q9UKV0 1011 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 ADAMTSL1Q8N6G6 1762 aa19.12■□□□□ 0.65
RFTN1-209ENST00000483671 SH2B2O14492 632 aaPredicted RBP19.11■□□□□ 0.65
RFTN1-209ENST00000483671 KDM4AO75164 1064 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 CYP2D6P10635 497 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 LIFRP42702 1097 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 PDE4BQ07343 736 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 NKX2-3Q8TAU0 364 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 LRRC2Q9BYS8 371 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 INCENPQ9NQS7 918 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 CHMP5Q9NZZ3 219 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 ANGEL1Q9UNK9 670 aaKnown RBP19.11■□□□□ 0.65
RFTN1-209ENST00000483671 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
RFTN1-209ENST00000483671 PFKFB2O60825 505 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 ST3GAL1Q11201 340 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 CFAP100Q494V2 611 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 CHST3Q7LGC8 479 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 OGFOD1Q8N543 542 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 SPRYD3Q8NCJ5 442 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 IGDCC4Q8TDY8 1250 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 CHMP4CQ96CF2 233 aa19.1■□□□□ 0.65
RFTN1-209ENST00000483671 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-209ENST00000483671 COL2A1P02458 1487 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-209ENST00000483671 GOLGB1Q14789 3259 aaKnown RBP19.09■□□□□ 0.65
RFTN1-209ENST00000483671 SMIM22K7EJ46 135 aa19.09■□□□□ 0.65
RFTN1-209ENST00000483671 POLR3DP05423 398 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-209ENST00000483671 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
RFTN1-209ENST00000483671 GTF3C6Q969F1 213 aa19.09■□□□□ 0.65
RFTN1-209ENST00000483671 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
RFTN1-209ENST00000483671 OSBPL5Q9H0X9 879 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-209ENST00000483671 ZNF287Q9HBT7 754 aa19.09■□□□□ 0.65
RFTN1-209ENST00000483671 DDX4Q9NQI0 724 aaKnown RBP19.09■□□□□ 0.65
RFTN1-209ENST00000483671 MYH1P12882 1939 aa19.08■□□□□ 0.65
RFTN1-209ENST00000483671 SPDYE2BA6NHP3 402 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms