RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 PAXIP1Q6ZW49 1069 aaPredicted RBP18.88■□□□□ 0.61
RPP40-206ENST00000483546 TICAM2Q86XR7 235 aa18.88■□□□□ 0.61
RPP40-206ENST00000483546 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
RPP40-206ENST00000483546 WDR33Q9C0J8 1336 aaKnown RBP18.88■□□□□ 0.61
RPP40-206ENST00000483546 TCRBV5S4A2TA0A5A2 114 aa18.87■□□□□ 0.61
RPP40-206ENST00000483546 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
RPP40-206ENST00000483546 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
RPP40-206ENST00000483546 SH3RF3Q8TEJ3 882 aaPredicted RBP18.87■□□□□ 0.61
RPP40-206ENST00000483546 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
RPP40-206ENST00000483546 OTOFQ9HC10 1997 aa18.87■□□□□ 0.61
RPP40-206ENST00000483546 ZNF532Q9HCE3 1301 aa18.87■□□□□ 0.61
RPP40-206ENST00000483546 MAGEB6P1A0A0J9YX57 407 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 UBE2Q2LH0YL09 131 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 USP2O75604 605 aaPredicted RBP18.86■□□□□ 0.61
RPP40-206ENST00000483546 MAP2K2P36507 400 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 ZNF157P51786 506 aaPredicted RBP18.86■□□□□ 0.61
RPP40-206ENST00000483546 NOGQ13253 232 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 PICALMQ13492 652 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 CYP4F22Q6NT55 531 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 ANKRD13AQ8IZ07 590 aa18.86■□□□□ 0.61
RPP40-206ENST00000483546 OSBPL5Q9H0X9 879 aaPredicted RBP18.86■□□□□ 0.61
RPP40-206ENST00000483546 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
RPP40-206ENST00000483546 DDX4Q9NQI0 724 aaKnown RBP18.86■□□□□ 0.61
RPP40-206ENST00000483546 MYH1P12882 1939 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 SLC10A3P09131 477 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 MOB2Q70IA6 237 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 ZSCAN29Q8IWY8 852 aaPredicted RBP18.85■□□□□ 0.61
RPP40-206ENST00000483546 CDAN1Q8IWY9 1227 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 MIGA1Q8NAN2 632 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 CSRNP1Q96S65 589 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 RIOK1Q9BRS2 568 aaKnown RBP18.85■□□□□ 0.61
RPP40-206ENST00000483546 ZNF341Q9BYN7 854 aa18.85■□□□□ 0.61
RPP40-206ENST00000483546 LAMB1P07942 1786 aa18.84■□□□□ 0.61
RPP40-206ENST00000483546 PRKG1Q13976 671 aa18.84■□□□□ 0.61
RPP40-206ENST00000483546 REM2Q8IYK8 340 aaPredicted RBP18.84■□□□□ 0.61
RPP40-206ENST00000483546 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
RPP40-206ENST00000483546 CRNKL1Q9BZJ0 848 aaKnown RBP18.84■□□□□ 0.61
RPP40-206ENST00000483546 FLT1P17948 1338 aa18.83■□□□□ 0.61
RPP40-206ENST00000483546 FAM155AB1AL88 458 aaPredicted RBP18.83■□□□□ 0.6
RPP40-206ENST00000483546 TBC1D12O60347 775 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 DYNLL1P63167 89 aaKnown RBP18.83■□□□□ 0.6
RPP40-206ENST00000483546 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 MAP3K10Q02779 954 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 RASAL3Q86YV0 1011 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 PLEKHM2Q8IWE5 1019 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 ZFPM1Q8IX07 1006 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.83■□□□□ 0.6
RPP40-206ENST00000483546 TGFBRAP1Q8WUH2 860 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 NAV1Q8NEY1 1877 aa18.83■□□□□ 0.6
RPP40-206ENST00000483546 DDTLA6NHG4 134 aaPredicted RBP18.82■□□□□ 0.6
RPP40-206ENST00000483546 RNF113AO15541 343 aaKnown RBP18.82■□□□□ 0.6
RPP40-206ENST00000483546 USP5P45974 858 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 ERICH6BQ5W0A0 696 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 SH3BP5LQ7L8J4 393 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 APPBP2Q92624 585 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 SLC10A4Q96EP9 437 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 FSD1Q9BTV5 496 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 ZNF112Q9UJU3 913 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 CSADQ9Y600 493 aa18.82■□□□□ 0.6
RPP40-206ENST00000483546 DDX60LQ5H9U9 1706 aaKnown RBP18.81■□□□□ 0.6
RPP40-206ENST00000483546 ZBTB48P10074 688 aaPredicted RBP18.81■□□□□ 0.6
RPP40-206ENST00000483546 MAP2K1Q02750 393 aaPredicted RBP18.81■□□□□ 0.6
RPP40-206ENST00000483546 CENPQQ7L2Z9 268 aaPredicted RBP18.81■□□□□ 0.6
RPP40-206ENST00000483546 MAPKAPK5Q8IW41 473 aa18.81■□□□□ 0.6
RPP40-206ENST00000483546 AIDAQ96BJ3 306 aa18.81■□□□□ 0.6
RPP40-206ENST00000483546 WRNIP1Q96S55 665 aa18.81■□□□□ 0.6
RPP40-206ENST00000483546 PI4KBQ9UBF8 816 aa18.81■□□□□ 0.6
RPP40-206ENST00000483546 HERC5Q9UII4 1024 aaKnown RBP18.81■□□□□ 0.6
RPP40-206ENST00000483546 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
RPP40-206ENST00000483546 GRM1Q13255 1194 aa18.8■□□□□ 0.6
RPP40-206ENST00000483546 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.8■□□□□ 0.6
RPP40-206ENST00000483546 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
RPP40-206ENST00000483546 TAOK2Q9UL54 1235 aa18.8■□□□□ 0.6
RPP40-206ENST00000483546 FZD1Q9UP38 647 aa18.8■□□□□ 0.6
RPP40-206ENST00000483546 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
RPP40-206ENST00000483546 MBD4O95243 580 aa18.79■□□□□ 0.6
RPP40-206ENST00000483546 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
RPP40-206ENST00000483546 LCORLQ8N3X6 602 aa18.79■□□□□ 0.6
RPP40-206ENST00000483546 ATP8A2Q9NTI2 1148 aa18.79■□□□□ 0.6
RPP40-206ENST00000483546 DOCK1Q14185 1865 aa18.78■□□□□ 0.6
RPP40-206ENST00000483546 VGLL4Q14135 290 aa18.78■□□□□ 0.6
RPP40-206ENST00000483546 NOL9Q5SY16 702 aaKnown RBP18.78■□□□□ 0.6
RPP40-206ENST00000483546 SPRYD7Q5W111 196 aa18.78■□□□□ 0.6
RPP40-206ENST00000483546 TTC6Q86TZ1 520 aa18.78■□□□□ 0.6
RPP40-206ENST00000483546 METTL16Q86W50 562 aaKnown RBP18.78■□□□□ 0.6
RPP40-206ENST00000483546 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
RPP40-206ENST00000483546 ARMT1Q9H993 441 aa18.78■□□□□ 0.6
RPP40-206ENST00000483546 AOC2O75106 756 aa18.77■□□□□ 0.6
RPP40-206ENST00000483546 GNAT2P19087 354 aa18.77■□□□□ 0.6
RPP40-206ENST00000483546 WNK4Q96J92 1243 aa18.77■□□□□ 0.6
RPP40-206ENST00000483546 CLMNQ96JQ2 1002 aa18.77■□□□□ 0.6
RPP40-206ENST00000483546 PUS7LQ9H0K6 701 aaKnown RBP18.77■□□□□ 0.6
RPP40-206ENST00000483546 EHD4Q9H223 541 aa18.77■□□□□ 0.6
RPP40-206ENST00000483546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.77■□□□□ 0.6
RPP40-206ENST00000483546 SPDYE5A6NIY4 337 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 PHF20L1A8MW92 1017 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 TRIM6-TRIM34B2RNG4 842 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 CTNND1O60716 968 aaKnown RBP18.76■□□□□ 0.59
RPP40-206ENST00000483546 KIF23Q02241 960 aaPredicted RBP18.76■□□□□ 0.59
RPP40-206ENST00000483546 SREBF2Q12772 1141 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms