RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PODXL2Q9NZ53 605 aa13.92□□□□□ -0.18
SND1-210ENST00000483503 CCDC88AQ3V6T2 1871 aa13.92□□□□□ -0.18
SND1-210ENST00000483503 STK36Q9NRP7 1315 aa13.91□□□□□ -0.18
SND1-210ENST00000483503 WTIPA6NIX2 430 aaPredicted RBP13.91□□□□□ -0.18
SND1-210ENST00000483503 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
SND1-210ENST00000483503 CCDC173Q0VFZ6 552 aa13.91□□□□□ -0.18
SND1-210ENST00000483503 SBK1Q52WX2 424 aa13.91□□□□□ -0.18
SND1-210ENST00000483503 RRP12Q5JTH9 1297 aaKnown RBP13.91□□□□□ -0.18
SND1-210ENST00000483503 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
SND1-210ENST00000483503 FBXO18Q8NFZ0 1043 aa13.91□□□□□ -0.18
SND1-210ENST00000483503 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
SND1-210ENST00000483503 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 DTNBO60941 627 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 UFL1O94874 794 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 BAG3O95817 575 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 APBA3O96018 575 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 FGRP09769 529 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 FDPSP14324 419 aaKnown RBP13.9□□□□□ -0.18
SND1-210ENST00000483503 RXRBP28702 533 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
SND1-210ENST00000483503 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
SND1-210ENST00000483503 GPSM2P81274 684 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 DDR1Q08345 913 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
SND1-210ENST00000483503 TRIM29Q14134 588 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 SLF2Q8IX21 1173 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 PROM2Q8N271 834 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 SDR42E1Q8WUS8 393 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 DDX19AQ9NUU7 478 aaKnown RBP13.9□□□□□ -0.18
SND1-210ENST00000483503 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
SND1-210ENST00000483503 RCOR1Q9UKL0 485 aa13.9□□□□□ -0.18
SND1-210ENST00000483503 ORC4O43929 436 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 CALM1P0DP23 149 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 CALM2P0DP24 149 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 CALM3P0DP25 149 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 MICU3Q86XE3 530 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 IQCA1Q86XH1 822 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 TBC1D22AQ8WUA7 517 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
SND1-210ENST00000483503 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
SND1-210ENST00000483503 IL1R1P14778 569 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 NPR1P16066 1061 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 PLCG2P16885 1265 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 IFNAR1P17181 557 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 PRDX5P30044 214 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 PDE6BP35913 854 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 PPP4CP60510 307 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 PDE4BQ07343 736 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 RTN1Q16799 776 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 CCDC178Q5BJE1 867 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 CTR9Q6PD62 1173 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 ZNF384Q8TF68 577 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 ALG1Q9BT22 464 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 RBSNQ9H1K0 784 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 MYH15Q9Y2K3 1946 aa13.88□□□□□ -0.19
SND1-210ENST00000483503 PPEF1O14829 653 aaPredicted RBP13.87□□□□□ -0.19
SND1-210ENST00000483503 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
SND1-210ENST00000483503 ALDH1B1P30837 517 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
SND1-210ENST00000483503 FOSBP53539 338 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 BICD2Q8TD16 824 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 PPP1R9BQ96SB3 815 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
SND1-210ENST00000483503 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 CD209Q9NNX6 404 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
SND1-210ENST00000483503 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
SND1-210ENST00000483503 AATFQ9NY61 560 aaKnown RBP eCLIP13.87□□□□□ -0.19
SND1-210ENST00000483503 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 PARP3Q9Y6F1 533 aa13.87□□□□□ -0.19
SND1-210ENST00000483503 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 USP17L21D6R901 530 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 YEATS4O95619 227 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 CDC27P30260 824 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
SND1-210ENST00000483503 NTRK3Q16288 839 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 MAP3K11Q16584 847 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 TRIM44Q96DX7 344 aaPredicted RBP13.86□□□□□ -0.19
SND1-210ENST00000483503 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
SND1-210ENST00000483503 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 LRRC37AA6NMS7 1700 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 NRXN2Q9P2S2 1712 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 TNKSO95271 1327 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 RGPD3A6NKT7 1758 aaPredicted RBP13.86□□□□□ -0.19
SND1-210ENST00000483503 RGPD4Q7Z3J3 1758 aa13.86□□□□□ -0.19
SND1-210ENST00000483503 C6orf229H3BNL8 230 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms