RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
VTI1A-205ENST00000483122 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 MYO1BO43795 1136 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 ERLIN2O94905 339 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 ABL1P00519 1130 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 APPP05067 770 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
VTI1A-205ENST00000483122 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
VTI1A-205ENST00000483122 GBP3Q9H0R5 595 aa13.48□□□□□ -0.25
VTI1A-205ENST00000483122 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-205ENST00000483122 SLC39A14Q15043 492 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 LONRF3Q496Y0 759 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 RIN2Q8WYP3 895 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
VTI1A-205ENST00000483122 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CTAGE15A4D2H0 777 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CTAGE8P0CG41 777 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 ZNF18P17022 549 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 KIF23Q02241 960 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-205ENST00000483122 FBXW10Q5XX13 1052 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 TTLL5Q6EMB2 1281 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 KCNV1Q6PIU1 500 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CTAGE6Q86UF2 777 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 ACBD3Q9H3P7 528 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
VTI1A-205ENST00000483122 PXDNQ92626 1479 aa13.46□□□□□ -0.25
VTI1A-205ENST00000483122 AKR1B15C9JRZ8 316 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-205ENST00000483122 HOXB7P09629 217 aa13.46□□□□□ -0.25
VTI1A-205ENST00000483122 HNRNPH1P31943 449 aaKnown RBP13.46□□□□□ -0.25
VTI1A-205ENST00000483122 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
VTI1A-205ENST00000483122 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
VTI1A-205ENST00000483122 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.25
VTI1A-205ENST00000483122 PHLPP1O60346 1717 aa13.46□□□□□ -0.26
VTI1A-205ENST00000483122 CCT5P48643 541 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 MNAT1P51948 309 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 BANK1Q8NDB2 785 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
VTI1A-205ENST00000483122 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-205ENST00000483122 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-205ENST00000483122 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 TEX33O43247 280 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 MAP2K2P36507 400 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.26
VTI1A-205ENST00000483122 TFCP2Q12800 502 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 TNNI3KQ59H18 835 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 DBNDD2Q9BQY9 259 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 FPGT-TNNI3KV9GXZ4 949 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 MRC1P22897 1456 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 CDHR2Q9BYE9 1310 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
VTI1A-205ENST00000483122 CLGNO14967 610 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 RBL2Q08999 1139 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 NR1I3Q14994 352 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
VTI1A-205ENST00000483122 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 MED15Q96RN5 788 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 EHD4Q9H223 541 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 RABEP2Q9H5N1 569 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 MAN1B1Q9UKM7 699 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 HPCAL4Q9UM19 191 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 FAM169AQ9Y6X4 670 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 ZC3H4Q9UPT8 1303 aaKnown RBP13.44□□□□□ -0.26
VTI1A-205ENST00000483122 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 RESP18Q5W5W9 173 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 KRT28Q7Z3Y7 464 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 PANX2Q96RD6 677 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 DONSONQ9NYP3 566 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 UTYO14607 1347 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
VTI1A-205ENST00000483122 RFX7Q2KHR2 1363 aa13.44□□□□□ -0.26
VTI1A-205ENST00000483122 HOXC9P31274 260 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 TUBB4BP68371 445 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 AKAP17AQ02040 695 aaKnown RBP13.43□□□□□ -0.26
VTI1A-205ENST00000483122 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
VTI1A-205ENST00000483122 TUBB2AQ13885 445 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 PTPAQ15257 358 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 WHAMMP3Q1A5X7 153 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 WDR93Q6P2C0 686 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 RASGRP2Q7LDG7 609 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 LINS1Q8NG48 757 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
VTI1A-205ENST00000483122 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 AIFM3Q96NN9 605 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 NAPGQ99747 312 aaPredicted RBP13.43□□□□□ -0.26
VTI1A-205ENST00000483122 HAUS7Q99871 368 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 TUBB2BQ9BVA1 445 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms