RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 SHISA5Q8N114 240 aa6.6□□□□□ -1.35
GTF3A-207ENST00000482655 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
GTF3A-207ENST00000482655 LRRC4CQ9HCJ2 640 aa6.6□□□□□ -1.35
GTF3A-207ENST00000482655 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
GTF3A-207ENST00000482655 TRIM37O94972 964 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 WNT11O96014 354 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 CELA3AP09093 270 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 ERVK-24P63145 666 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 CYP27C1Q4G0S4 372 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 ZC3H12AQ5D1E8 599 aaKnown RBP6.59□□□□□ -1.35
GTF3A-207ENST00000482655 GRIN3AQ8TCU5 1115 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 GATA6Q92908 595 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 DUSP9Q99956 384 aaKnown RBP6.59□□□□□ -1.35
GTF3A-207ENST00000482655 C1GALT1Q9NS00 363 aa6.59□□□□□ -1.35
GTF3A-207ENST00000482655 LMNB1P20700 586 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 BMP6P22004 513 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 GP2P55259 537 aaKnown RBP6.58□□□□□ -1.36
GTF3A-207ENST00000482655 CDK5R2Q13319 367 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 OGFOD3Q6PK18 319 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 SEZ6L2Q6UXD5 910 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
GTF3A-207ENST00000482655 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 CYP8B1Q9UNU6 501 aa6.58□□□□□ -1.36
GTF3A-207ENST00000482655 FAM87AP0C7U9 286 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
GTF3A-207ENST00000482655 MSMPQ1L6U9 139 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 SCARA3Q6AZY7 606 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 VSIG10LQ86VR7 867 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 RNF214Q8ND24 703 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 ISL2Q96A47 359 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 ELMO3Q96BJ8 720 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 BSDC1Q9NW68 430 aaPredicted RBP6.57□□□□□ -1.36
GTF3A-207ENST00000482655 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 AK5Q9Y6K8 562 aa6.57□□□□□ -1.36
GTF3A-207ENST00000482655 DCDC2CA8MYV0 355 aa6.56□□□□□ -1.36
GTF3A-207ENST00000482655 XPCQ01831 940 aaPredicted RBP6.56□□□□□ -1.36
GTF3A-207ENST00000482655 PSMD2Q13200 908 aa6.56□□□□□ -1.36
GTF3A-207ENST00000482655 CCDC27Q2M243 656 aa6.56□□□□□ -1.36
GTF3A-207ENST00000482655 MPRIPQ6WCQ1 1025 aa6.56□□□□□ -1.36
GTF3A-207ENST00000482655 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
GTF3A-207ENST00000482655 CSADQ9Y600 493 aa6.56□□□□□ -1.36
GTF3A-207ENST00000482655 NEFMP07197 916 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 IRAK1P51617 712 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 PPM1JQ5JR12 505 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 ARHGAP27Q6ZUM4 889 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 NPAS4Q8IUM7 802 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 PARP2Q9UGN5 583 aa6.55□□□□□ -1.36
GTF3A-207ENST00000482655 OAS3Q9Y6K5 1087 aaKnown RBP6.55□□□□□ -1.36
GTF3A-207ENST00000482655 FANCGO15287 622 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 PRNPP04156 253 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 RASIP1Q5U651 963 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 DNAJC14Q6Y2X3 702 aaPredicted RBP6.54□□□□□ -1.36
GTF3A-207ENST00000482655 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 C12orf40Q86WS4 652 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 GZF1Q9H116 711 aaPredicted RBP6.54□□□□□ -1.36
GTF3A-207ENST00000482655 CCDC39Q9UFE4 941 aa6.54□□□□□ -1.36
GTF3A-207ENST00000482655 ZC3H7BQ9UGR2 993 aaKnown RBP6.54□□□□□ -1.36
GTF3A-207ENST00000482655 PRAMEF27A3QJZ7 478 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 ADAMTS4O75173 837 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 ERCC3P19447 782 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 ITGAEP38570 1179 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 HDXQ7Z353 690 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 TOP6BLQ8N6T0 577 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 KCT2Q8NC54 265 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 FLCNQ8NFG4 579 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 RNF19AQ9NV58 838 aa6.53□□□□□ -1.36
GTF3A-207ENST00000482655 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
GTF3A-207ENST00000482655 DAB2P98082 770 aa6.52□□□□□ -1.37
GTF3A-207ENST00000482655 ZBTB37Q5TC79 503 aa6.52□□□□□ -1.37
GTF3A-207ENST00000482655 DIEXFQ68CQ4 756 aaKnown RBP6.52□□□□□ -1.37
GTF3A-207ENST00000482655 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
GTF3A-207ENST00000482655 LEFTY1O75610 366 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 RLBP1P12271 317 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 MAP3K11Q16584 847 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 MEI1Q5TIA1 1274 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 STK11IPQ8N1F8 1099 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 FAM181AQ8N9Y4 354 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 ZNF507Q8TCN5 953 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 PLPPR2Q96GM1 343 aa6.51□□□□□ -1.37
GTF3A-207ENST00000482655 NTF4P34130 210 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 LIG3P49916 1009 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 RING1Q06587 406 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
GTF3A-207ENST00000482655 LRFN4Q6PJG9 635 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 TMC4Q7Z404 712 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 AGBL5Q8NDL9 886 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 GAL3ST3Q96A11 431 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 MISP3Q96FF7 219 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 FAM161BQ96MY7 647 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 SLC5A6Q9Y289 635 aa6.5□□□□□ -1.37
GTF3A-207ENST00000482655 SORBS3O60504 671 aa6.49□□□□□ -1.37
GTF3A-207ENST00000482655 ETF1P62495 437 aaKnown RBP6.49□□□□□ -1.37
GTF3A-207ENST00000482655 PTPN11Q06124 597 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms