RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-212ENST00000482251 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 RCAN3Q9UKA8 241 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 TRIM17Q9Y577 477 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
CPSF4-212ENST00000482251 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 ENTPD3O75355 529 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-212ENST00000482251 RHBDL3P58872 404 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 PPIL2Q13356 520 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 SNAPC2Q13487 334 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
CPSF4-212ENST00000482251 EAF2Q96CJ1 260 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-212ENST00000482251 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-212ENST00000482251 NOP58Q9Y2X3 529 aaKnown RBP12.85□□□□□ -0.35
CPSF4-212ENST00000482251 DOCK1Q14185 1865 aa12.85□□□□□ -0.35
CPSF4-212ENST00000482251 HTTP42858 3142 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 GPR75-ASB3A0A0A6YYF3 556 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 BTBD19C9JJ37 291 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 CYP2E1P05181 493 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-212ENST00000482251 CETPP11597 493 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 ZAP70P43403 619 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 GSTO1P78417 241 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 CAP1Q01518 475 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-212ENST00000482251 OTOP1Q7RTM1 612 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 AACSQ86V21 672 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-212ENST00000482251 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-212ENST00000482251 IL1RAPL2Q9NP60 686 aa12.84□□□□□ -0.35
CPSF4-212ENST00000482251 PIH1D3Q9NQM4 214 aaKnown RBP12.84□□□□□ -0.35
CPSF4-212ENST00000482251 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPSF4-212ENST00000482251 PPATQ06203 517 aa12.83□□□□□ -0.36
CPSF4-212ENST00000482251 PKN2Q16513 984 aaKnown RBP12.83□□□□□ -0.36
CPSF4-212ENST00000482251 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
CPSF4-212ENST00000482251 FBXO46Q6PJ61 603 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-212ENST00000482251 ADGRA1Q86SQ6 560 aa12.83□□□□□ -0.36
CPSF4-212ENST00000482251 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-212ENST00000482251 TEX11Q8IYF3 940 aa12.83□□□□□ -0.36
CPSF4-212ENST00000482251 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.36
CPSF4-212ENST00000482251 ZNF112Q9UJU3 913 aa12.83□□□□□ -0.36
CPSF4-212ENST00000482251 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 PHF20L1A8MW92 1017 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 LDHCP07864 332 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 MS4A1P11836 297 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 SP3Q02447 781 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-212ENST00000482251 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
CPSF4-212ENST00000482251 SCYL3Q8IZE3 742 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 NOL10Q9BSC4 688 aaKnown RBP12.82□□□□□ -0.36
CPSF4-212ENST00000482251 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-212ENST00000482251 PICK1Q9NRD5 415 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 DDX19BQ9UMR2 479 aa12.82□□□□□ -0.36
CPSF4-212ENST00000482251 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
CPSF4-212ENST00000482251 IDH1O75874 414 aaKnown RBP12.81□□□□□ -0.36
CPSF4-212ENST00000482251 RGS19P49795 217 aa12.81□□□□□ -0.36
CPSF4-212ENST00000482251 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
CPSF4-212ENST00000482251 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
CPSF4-212ENST00000482251 ATAD5Q96QE3 1844 aa12.81□□□□□ -0.36
CPSF4-212ENST00000482251 CENPFP49454 3210 aa12.81□□□□□ -0.36
CPSF4-212ENST00000482251 PDHXO00330 501 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 PTPRAP18433 802 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 RHPN1Q8TCX5 695 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPSF4-212ENST00000482251 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 PHIPQ8WWQ0 1821 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 PTPRFP10586 1907 aa12.8□□□□□ -0.36
CPSF4-212ENST00000482251 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-212ENST00000482251 TRIM75PA6NK02 468 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 TLR2O60603 784 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 BAG3O95817 575 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 CYP7A1P22680 504 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 DYNLL1P63167 89 aaKnown RBP12.79□□□□□ -0.36
CPSF4-212ENST00000482251 MOGSQ13724 837 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 GADL1Q6ZQY3 521 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 ZNF512BQ96KM6 892 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-212ENST00000482251 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
CPSF4-212ENST00000482251 FLT1P17948 1338 aa12.79□□□□□ -0.36
CPSF4-212ENST00000482251 HMMRO75330 724 aa12.78□□□□□ -0.36
CPSF4-212ENST00000482251 CYP2C8P10632 490 aa12.78□□□□□ -0.36
CPSF4-212ENST00000482251 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
CPSF4-212ENST00000482251 ANKRD23Q86SG2 305 aa12.78□□□□□ -0.36
CPSF4-212ENST00000482251 DNAJC2Q99543 621 aaKnown RBP12.78□□□□□ -0.36
CPSF4-212ENST00000482251 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms