RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 HMGCRP04035 888 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 CHAF1AQ13111 956 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 UBE4AQ14139 1066 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 LRRC26Q2I0M4 334 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 GADL1Q6ZQY3 521 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 FAM83AQ86UY5 434 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 TEKT1Q969V4 418 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
SMARCE1-210ENST00000481231 CACNA1FO60840 1977 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 TNFRSF10AO00220 468 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 APOBEC3HQ6NTF7 200 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 ANKRD13CQ8N6S4 541 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 COA7Q96BR5 231 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 HMX1Q9NP08 348 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 ZNF112Q9UJU3 913 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
SMARCE1-210ENST00000481231 A0A0G2JLL6 359 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 TCP10Q12799 353 aa11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 NOL9Q5SY16 702 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 PRRT2Q7Z6L0 340 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 FBXO33Q7Z6M2 555 aa11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 ZDHHC15Q96MV8 337 aa11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 SEMA6BQ9H3T3 888 aa11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 BICC1Q9H694 974 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 UTYO14607 1347 aa11.86□□□□□ -0.51
SMARCE1-210ENST00000481231 CXCL11O14625 94 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 COL6A1P12109 1028 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 FOSL2P15408 326 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 RABL6Q3YEC7 729 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 FKBP1CQ5VVH2 108 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 ANKRD44Q8N8A2 993 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 TTYH1Q9H313 450 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 ZHX2Q9Y6X8 837 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 MROH5Q6ZUA9 1318 aa11.85□□□□□ -0.51
SMARCE1-210ENST00000481231 HDLBPQ00341 1268 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 TJAP1Q5JTD0 557 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 FASTKD5Q7L8L6 764 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 TRIB2Q92519 343 aa11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 LBHD1Q9BQE6 289 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-210ENST00000481231 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 NFIAQ12857 509 aa11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 FAM151AQ8WW52 585 aa11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
SMARCE1-210ENST00000481231 TRIM75PA6NK02 468 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 PTPRAP18433 802 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 TREML2Q5T2D2 321 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 KLHDC4Q8TBB5 520 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 GJD2Q9UKL4 321 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
SMARCE1-210ENST00000481231 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 PDE8BO95263 885 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 MAP3K12Q12852 859 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 SHHQ15465 462 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 MAP3K21Q5TCX8 1036 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 ZFPM1Q8IX07 1006 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 SCYL3Q8IZE3 742 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 PICK1Q9NRD5 415 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 AGTPBP1Q9UPW5 1226 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 DNAH12Q6ZR08 3092 aa11.81□□□□□ -0.52
SMARCE1-210ENST00000481231 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 PHF20L1A8MW92 1017 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 CYP2B6P20813 491 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 CDC42EP5Q6NZY7 148 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 SSH1Q8WYL5 1049 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 USP44Q9H0E7 712 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 PTPRCP08575 1304 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
SMARCE1-210ENST00000481231 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 FGFR2P21802 821 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 HHIPL2Q6UWX4 724 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 MRIQ9BWK5 157 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms