RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 FKBP1BP68106 108 aa24.59■■□□□ 1.53
CTSA-206ENST00000480961 UBE3CQ15386 1083 aa24.59■■□□□ 1.53
CTSA-206ENST00000480961 CENPQQ7L2Z9 268 aaPredicted RBP24.59■■□□□ 1.53
CTSA-206ENST00000480961 ARMC9Q7Z3E5 817 aa24.59■■□□□ 1.53
CTSA-206ENST00000480961 SKAP1Q86WV1 359 aa24.59■■□□□ 1.53
CTSA-206ENST00000480961 LCORLQ8N3X6 602 aa24.59■■□□□ 1.53
CTSA-206ENST00000480961 TRIM6-TRIM34B2RNG4 842 aa24.58■■□□□ 1.53
CTSA-206ENST00000480961 RNF113AO15541 343 aaKnown RBP24.58■■□□□ 1.53
CTSA-206ENST00000480961 PPP1R12BO60237 982 aaPredicted RBP24.58■■□□□ 1.53
CTSA-206ENST00000480961 MBD4O95243 580 aa24.58■■□□□ 1.53
CTSA-206ENST00000480961 TMED8Q6PL24 325 aaPredicted RBP24.58■■□□□ 1.53
CTSA-206ENST00000480961 OSBPL5Q9H0X9 879 aaPredicted RBP24.58■■□□□ 1.53
CTSA-206ENST00000480961 OSBPL3Q9H4L5 887 aa24.58■■□□□ 1.53
CTSA-206ENST00000480961 SAP30BPQ9UHR5 308 aaKnown RBP24.58■■□□□ 1.53
CTSA-206ENST00000480961 ECM29Q5VYK3 1845 aa24.58■■□□□ 1.53
CTSA-206ENST00000480961 MAST2Q6P0Q8 1798 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 USP5P45974 858 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 SLC4A8Q2Y0W8 1093 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 RILPL2Q969X0 211 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 EVI5LQ96CN4 794 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 KLRG1Q96E93 195 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 CSRNP1Q96S65 589 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 PUS7LQ9H0K6 701 aaKnown RBP24.57■■□□□ 1.52
CTSA-206ENST00000480961 FLT1P17948 1338 aa24.57■■□□□ 1.52
CTSA-206ENST00000480961 ZNF157P51786 506 aaPredicted RBP24.56■■□□□ 1.52
CTSA-206ENST00000480961 RGMBQ6NW40 437 aa24.56■■□□□ 1.52
CTSA-206ENST00000480961 CAPNS2Q96L46 248 aa24.56■■□□□ 1.52
CTSA-206ENST00000480961 TRPM7Q96QT4 1865 aa24.55■■□□□ 1.52
CTSA-206ENST00000480961 PRKAB2O43741 272 aa24.55■■□□□ 1.52
CTSA-206ENST00000480961 LDLRAD1Q5T700 205 aa24.55■■□□□ 1.52
CTSA-206ENST00000480961 OSBP2Q969R2 916 aa24.55■■□□□ 1.52
CTSA-206ENST00000480961 CLMNQ96JQ2 1002 aa24.55■■□□□ 1.52
CTSA-206ENST00000480961 RPAP1Q9BWH6 1393 aaPredicted RBP24.54■■□□□ 1.52
CTSA-206ENST00000480961 DOCK2Q92608 1830 aa24.54■■□□□ 1.52
CTSA-206ENST00000480961 NPM3O75607 178 aaKnown RBP24.54■■□□□ 1.52
CTSA-206ENST00000480961 IREB2P48200 963 aaKnown RBP24.54■■□□□ 1.52
CTSA-206ENST00000480961 SDR42E1Q8WUS8 393 aa24.54■■□□□ 1.52
CTSA-206ENST00000480961 SEC62Q99442 399 aaKnown RBP24.54■■□□□ 1.52
CTSA-206ENST00000480961 CRNKL1Q9BZJ0 848 aaKnown RBP24.54■■□□□ 1.52
CTSA-206ENST00000480961 PALD1Q9ULE6 856 aa24.54■■□□□ 1.52
CTSA-206ENST00000480961 WDR33Q9C0J8 1336 aaKnown RBP24.54■■□□□ 1.52
CTSA-206ENST00000480961 FAM196BA6NMK8 535 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 AOC2O75106 756 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 ZFYP08048 801 aaPredicted RBP24.53■■□□□ 1.52
CTSA-206ENST00000480961 MAP3K11Q16584 847 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 CERS3Q8IU89 383 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 APPBP2Q92624 585 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 AIDAQ96BJ3 306 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 HHIPL1Q96JK4 782 aa24.53■■□□□ 1.52
CTSA-206ENST00000480961 M0R2C6 588 aa24.52■■□□□ 1.52
CTSA-206ENST00000480961 DCAF15Q66K64 600 aa24.52■■□□□ 1.52
CTSA-206ENST00000480961 HOOK2Q96ED9 719 aa24.52■■□□□ 1.52
CTSA-206ENST00000480961 PAPPA2Q9BXP8 1791 aa24.52■■□□□ 1.52
CTSA-206ENST00000480961 PCNTO95613 3336 aa24.51■■□□□ 1.51
CTSA-206ENST00000480961 MAP3K9P80192 1104 aa24.51■■□□□ 1.51
CTSA-206ENST00000480961 MKRN3Q13064 507 aaKnown RBP24.51■■□□□ 1.51
CTSA-206ENST00000480961 LRRFIP1Q32MZ4 808 aaKnown RBP24.51■■□□□ 1.51
CTSA-206ENST00000480961 ZKSCAN4Q969J2 545 aaPredicted RBP24.51■■□□□ 1.51
CTSA-206ENST00000480961 SLC10A4Q96EP9 437 aa24.51■■□□□ 1.51
CTSA-206ENST00000480961 WRNIP1Q96S55 665 aa24.51■■□□□ 1.51
CTSA-206ENST00000480961 ZIC5Q96T25 663 aa24.51■■□□□ 1.51
CTSA-206ENST00000480961 ZNF341Q9BYN7 854 aa24.51■■□□□ 1.51
CTSA-206ENST00000480961 GSPT1P15170 499 aaKnown RBP24.5■■□□□ 1.51
CTSA-206ENST00000480961 ECE1P42892 770 aa24.5■■□□□ 1.51
CTSA-206ENST00000480961 ZMYM1Q5SVZ6 1142 aa24.5■■□□□ 1.51
CTSA-206ENST00000480961 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.5■■□□□ 1.51
CTSA-206ENST00000480961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.5■■□□□ 1.51
CTSA-206ENST00000480961 STRBPQ96SI9 672 aaKnown RBP24.5■■□□□ 1.51
CTSA-206ENST00000480961 ELP3Q9H9T3 547 aa24.5■■□□□ 1.51
CTSA-206ENST00000480961 PPP4R2Q9NY27 417 aa24.5■■□□□ 1.51
CTSA-206ENST00000480961 SLC4A4Q9Y6R1 1079 aa24.5■■□□□ 1.51
CTSA-206ENST00000480961 ATRNL1Q5VV63 1379 aa24.5■■□□□ 1.51
CTSA-206ENST00000480961 FAM155AB1AL88 458 aaPredicted RBP24.49■■□□□ 1.51
CTSA-206ENST00000480961 INPP5BP32019 993 aa24.49■■□□□ 1.51
CTSA-206ENST00000480961 TTC22Q5TAA0 569 aa24.49■■□□□ 1.51
CTSA-206ENST00000480961 RASAL3Q86YV0 1011 aa24.49■■□□□ 1.51
CTSA-206ENST00000480961 ANKRD13AQ8IZ07 590 aa24.49■■□□□ 1.51
CTSA-206ENST00000480961 EVX2Q03828 476 aa24.48■■□□□ 1.51
CTSA-206ENST00000480961 VGLL4Q14135 290 aa24.48■■□□□ 1.51
CTSA-206ENST00000480961 CCDC129Q6ZRS4 1044 aa24.48■■□□□ 1.51
CTSA-206ENST00000480961 CCDC102AQ96A19 550 aa24.48■■□□□ 1.51
CTSA-206ENST00000480961 FAM227BQ96M60 508 aa24.48■■□□□ 1.51
CTSA-206ENST00000480961 DCP1AQ9NPI6 582 aaPredicted RBP24.48■■□□□ 1.51
CTSA-206ENST00000480961 MCM9Q9NXL9 1143 aa24.48■■□□□ 1.51
CTSA-206ENST00000480961 GPAA1O43292 621 aa24.47■■□□□ 1.51
CTSA-206ENST00000480961 SLC10A3P09131 477 aa24.47■■□□□ 1.51
CTSA-206ENST00000480961 CYP2D6P10635 497 aa24.47■■□□□ 1.51
CTSA-206ENST00000480961 ERICH6BQ5W0A0 696 aa24.47■■□□□ 1.51
CTSA-206ENST00000480961 CNKSR2Q8WXI2 1034 aa24.47■■□□□ 1.51
CTSA-206ENST00000480961 DHX36Q9H2U1 1008 aaKnown RBP24.47■■□□□ 1.51
CTSA-206ENST00000480961 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.47■■□□□ 1.51
CTSA-206ENST00000480961 PI4KBQ9UBF8 816 aa24.47■■□□□ 1.51
CTSA-206ENST00000480961 PHF20L1A8MW92 1017 aa24.46■■□□□ 1.51
CTSA-206ENST00000480961 POLR3DP05423 398 aaPredicted RBP24.46■■□□□ 1.51
CTSA-206ENST00000480961 SDSP20132 328 aa24.46■■□□□ 1.51
CTSA-206ENST00000480961 ZNF112Q9UJU3 913 aa24.46■■□□□ 1.51
CTSA-206ENST00000480961 CSADQ9Y600 493 aa24.46■■□□□ 1.51
CTSA-206ENST00000480961 HLA-DOAP06340 250 aa24.45■■□□□ 1.5
CTSA-206ENST00000480961 PLCD1P51178 756 aa24.45■■□□□ 1.5
CTSA-206ENST00000480961 MAP3K10Q02779 954 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms