RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 C11orf16Q9NQ32 467 aa15.32■□□□□ 0.04
USP11-208ENST00000480104 ATP11BQ9Y2G3 1177 aa15.32■□□□□ 0.04
USP11-208ENST00000480104 ZHX2Q9Y6X8 837 aa15.32■□□□□ 0.04
USP11-208ENST00000480104 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
USP11-208ENST00000480104 BMP1P13497 986 aa15.31■□□□□ 0.04
USP11-208ENST00000480104 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
USP11-208ENST00000480104 TCF20Q9UGU0 1960 aaKnown RBP15.31■□□□□ 0.04
USP11-208ENST00000480104 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
USP11-208ENST00000480104 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
USP11-208ENST00000480104 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
USP11-208ENST00000480104 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
USP11-208ENST00000480104 TEKT1Q969V4 418 aa15.3■□□□□ 0.04
USP11-208ENST00000480104 TIFAQ96CG3 184 aa15.3■□□□□ 0.04
USP11-208ENST00000480104 PRDM12Q9H4Q4 367 aa15.3■□□□□ 0.04
USP11-208ENST00000480104 AGTPBP1Q9UPW5 1226 aa15.3■□□□□ 0.04
USP11-208ENST00000480104 ZDBF2Q9HCK1 2354 aa15.29■□□□□ 0.04
USP11-208ENST00000480104 ZKSCAN1P17029 563 aaPredicted RBP15.29■□□□□ 0.04
USP11-208ENST00000480104 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
USP11-208ENST00000480104 TREML2Q5T2D2 321 aa15.29■□□□□ 0.04
USP11-208ENST00000480104 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
USP11-208ENST00000480104 ZDHHC15Q96MV8 337 aa15.29■□□□□ 0.04
USP11-208ENST00000480104 CXXC1Q9P0U4 656 aaPredicted RBP15.29■□□□□ 0.04
USP11-208ENST00000480104 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
USP11-208ENST00000480104 PLXNB2O15031 1838 aa15.29■□□□□ 0.04
USP11-208ENST00000480104 GPR37L1O60883 481 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 PTPRAP18433 802 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 EPHB4P54760 987 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 ADGRE1Q14246 886 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 PDLIM7Q9NR12 457 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 PICK1Q9NRD5 415 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 PNMA3Q9UL41 463 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 MAP3K2Q9Y2U5 619 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 USP34Q70CQ2 3546 aa15.28■□□□□ 0.04
USP11-208ENST00000480104 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
USP11-208ENST00000480104 GYG1P46976 350 aa15.27■□□□□ 0.04
USP11-208ENST00000480104 KCNQ1P51787 676 aa15.27■□□□□ 0.04
USP11-208ENST00000480104 TFF2Q03403 129 aa15.27■□□□□ 0.04
USP11-208ENST00000480104 LMOD3Q0VAK6 560 aa15.27■□□□□ 0.04
USP11-208ENST00000480104 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
USP11-208ENST00000480104 AK9Q5TCS8 1911 aa15.26■□□□□ 0.03
USP11-208ENST00000480104 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
USP11-208ENST00000480104 XRCC5P13010 732 aaKnown RBP15.26■□□□□ 0.03
USP11-208ENST00000480104 TCP10Q12799 353 aa15.26■□□□□ 0.03
USP11-208ENST00000480104 CWF19L2Q2TBE0 894 aaKnown RBP15.26■□□□□ 0.03
USP11-208ENST00000480104 SH3RF1Q7Z6J0 888 aa15.26■□□□□ 0.03
USP11-208ENST00000480104 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
USP11-208ENST00000480104 PTPRFP10586 1907 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 H7C1W4 665 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 PLIN1O60240 522 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 CSF1RP07333 972 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 IGFBP4P22692 258 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 HIBADHP31937 336 aaKnown RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 GCLCP48506 637 aaPredicted RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 CCL14Q16627 93 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 TRIM60Q495X7 471 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 TRMT44Q8IYL2 757 aaKnown RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 SOCS4Q8WXH5 440 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 KHSRPQ92945 711 aaKnown RBP eCLIP15.25■□□□□ 0.03
USP11-208ENST00000480104 NUDT12Q9BQG2 462 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 PLA2G12BQ9BX93 195 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 PNNQ9H307 717 aaKnown RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
USP11-208ENST00000480104 DAGLAQ9Y4D2 1042 aa15.25■□□□□ 0.03
USP11-208ENST00000480104 TRANK1O15050 2925 aa15.24■□□□□ 0.03
USP11-208ENST00000480104 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
USP11-208ENST00000480104 DNM1LO00429 736 aa15.24■□□□□ 0.03
USP11-208ENST00000480104 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
USP11-208ENST00000480104 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
USP11-208ENST00000480104 NHLH1Q02575 133 aa15.24■□□□□ 0.03
USP11-208ENST00000480104 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
USP11-208ENST00000480104 FRMPD3Q5JV73 1810 aa15.24■□□□□ 0.03
USP11-208ENST00000480104 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
USP11-208ENST00000480104 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
USP11-208ENST00000480104 NFIAQ12857 509 aa15.23■□□□□ 0.03
USP11-208ENST00000480104 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
USP11-208ENST00000480104 IQSEC3Q9UPP2 1182 aaPredicted RBP15.23■□□□□ 0.03
USP11-208ENST00000480104 C5orf42Q9H799 3197 aa15.22■□□□□ 0.03
USP11-208ENST00000480104 SMIM22K7EJ46 135 aa15.22■□□□□ 0.03
USP11-208ENST00000480104 ITGB8P26012 769 aa15.22■□□□□ 0.03
USP11-208ENST00000480104 SLC39A5Q6ZMH5 540 aa15.22■□□□□ 0.03
USP11-208ENST00000480104 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
USP11-208ENST00000480104 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 PEX10O60683 326 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 PBX2P40425 430 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 CASP7P55210 303 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 AAK1Q2M2I8 961 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 LPAR1Q92633 364 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 USP6NLQ92738 828 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
USP11-208ENST00000480104 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
USP11-208ENST00000480104 DDX20Q9UHI6 824 aaKnown RBP15.21■□□□□ 0.03
USP11-208ENST00000480104 SPTBN4Q9H254 2564 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms