RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PPIL2Q13356 520 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 SNAPC2Q13487 334 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 PLPP6Q8IY26 295 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 TMOD2Q9NZR1 351 aa12.99□□□□□ -0.33
SMURF1-204ENST00000480055 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
SMURF1-204ENST00000480055 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 ADGRA2Q96PE1 1338 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 IRF6O14896 467 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 ANP32CO43423 234 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 CTGFP29279 349 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 CACNB3P54284 484 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 HDLBPQ00341 1268 aaKnown RBP12.98□□□□□ -0.33
SMURF1-204ENST00000480055 MFSD10Q14728 455 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 MTFR1Q15390 333 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 GRIK5Q16478 980 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 TEKT1Q969V4 418 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 WRNIP1Q96S55 665 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
SMURF1-204ENST00000480055 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
SMURF1-204ENST00000480055 C17orf99Q6UX52 265 aa12.97□□□□□ -0.33
SMURF1-204ENST00000480055 FAM83AQ86UY5 434 aa12.97□□□□□ -0.33
SMURF1-204ENST00000480055 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
SMURF1-204ENST00000480055 ZKSCAN4Q969J2 545 aaPredicted RBP12.97□□□□□ -0.33
SMURF1-204ENST00000480055 HOOK2Q96ED9 719 aa12.97□□□□□ -0.33
SMURF1-204ENST00000480055 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
SMURF1-204ENST00000480055 SRRDQ9UH36 339 aa12.97□□□□□ -0.33
SMURF1-204ENST00000480055 RIPOR2Q9Y4F9 1068 aa12.97□□□□□ -0.33
SMURF1-204ENST00000480055 SNPHO15079 494 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 LRRC24Q50LG9 513 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 FKBP1CQ5VVH2 108 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 FBXO33Q7Z6M2 555 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 DPF3Q92784 378 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 ATAD5Q96QE3 1844 aa12.96□□□□□ -0.33
SMURF1-204ENST00000480055 MYPNQ86TC9 1320 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 GJB1P08034 283 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 OSBPP22059 807 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 GRK4P32298 578 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 PSMC4P43686 418 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 GJA8P48165 433 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 BCAMP50895 628 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 PPATQ06203 517 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 ZDHHC15Q96MV8 337 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 HTATIP2Q9BUP3 242 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
SMURF1-204ENST00000480055 MAST3O60307 1309 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 PDE8BO95263 885 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
SMURF1-204ENST00000480055 CCL5P13501 91 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 HOXD10P28358 340 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 RAET1EQ8TD07 263 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
SMURF1-204ENST00000480055 COL6A3P12111 3177 aa12.93□□□□□ -0.34
SMURF1-204ENST00000480055 CUL9Q8IWT3 2517 aa12.93□□□□□ -0.34
SMURF1-204ENST00000480055 PDHXO00330 501 aa12.93□□□□□ -0.34
SMURF1-204ENST00000480055 MOGSQ13724 837 aa12.93□□□□□ -0.34
SMURF1-204ENST00000480055 APOBEC3HQ6NTF7 200 aaKnown RBP12.93□□□□□ -0.34
SMURF1-204ENST00000480055 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.93□□□□□ -0.34
SMURF1-204ENST00000480055 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
SMURF1-204ENST00000480055 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
SMURF1-204ENST00000480055 INPP5BP32019 993 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 PUM3Q15397 648 aaKnown RBP12.92□□□□□ -0.34
SMURF1-204ENST00000480055 E2F4Q16254 413 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
SMURF1-204ENST00000480055 HHIPL2Q6UWX4 724 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 ANKRD44Q8N8A2 993 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 VGLL2Q8N8G2 317 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 RNF208Q9H0X6 261 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 ZNF112Q9UJU3 913 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 NR2E3Q9Y5X4 410 aa12.92□□□□□ -0.34
SMURF1-204ENST00000480055 UTYO14607 1347 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 PLXNB2O15031 1838 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
SMURF1-204ENST00000480055 BCRP11274 1271 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 SLC5A1P13866 664 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 UBXN2AP68543 259 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 PRKCZQ05513 592 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 TCP10Q12799 353 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
SMURF1-204ENST00000480055 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
SMURF1-204ENST00000480055 U2AF1L4Q8WU68 220 aaKnown RBP12.91□□□□□ -0.34
SMURF1-204ENST00000480055 PARK7Q99497 189 aaKnown RBP12.91□□□□□ -0.34
SMURF1-204ENST00000480055 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
SMURF1-204ENST00000480055 DLL1O00548 723 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms