RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SLC51AQ86UW1 340 aa15.16■□□□□ 0.02
SEC13-216ENST00000479868 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
SEC13-216ENST00000479868 FAM200AQ8TCP9 573 aa15.16■□□□□ 0.02
SEC13-216ENST00000479868 PCDHA7Q9UN72 937 aa15.16■□□□□ 0.02
SEC13-216ENST00000479868 ZKSCAN5Q9Y2L8 839 aa15.16■□□□□ 0.02
SEC13-216ENST00000479868 AFF2P51816 1311 aa15.15■□□□□ 0.02
SEC13-216ENST00000479868 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
SEC13-216ENST00000479868 ANO6Q4KMQ2 910 aa15.15■□□□□ 0.02
SEC13-216ENST00000479868 FAM196AQ6ZSG2 479 aa15.15■□□□□ 0.02
SEC13-216ENST00000479868 LRRC4BQ9NT99 713 aa15.15■□□□□ 0.02
SEC13-216ENST00000479868 NPHP1O15259 732 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 PTMAP06454 111 aaKnown RBP15.14■□□□□ 0.01
SEC13-216ENST00000479868 PLCB2Q00722 1185 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 TRAPPC3LQ5T215 181 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 CPLX2Q6PUV4 134 aaKnown RBP15.14■□□□□ 0.01
SEC13-216ENST00000479868 TXNRD3Q86VQ6 643 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 ENGASEQ8NFI3 743 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 ANKRD2Q9GZV1 360 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 SEMA3EO15041 775 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 HIBADHP31937 336 aaKnown RBP15.14■□□□□ 0.01
SEC13-216ENST00000479868 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
SEC13-216ENST00000479868 WTAPQ15007 396 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 KRT40Q6A162 431 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 LUZP1Q86V48 1076 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 MPNDQ8N594 471 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 RNF41Q9H4P4 317 aaPredicted RBP15.14■□□□□ 0.01
SEC13-216ENST00000479868 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
SEC13-216ENST00000479868 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 NFIXQ14938 502 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 SART3Q15020 963 aaKnown RBP15.13■□□□□ 0.01
SEC13-216ENST00000479868 CCDC73Q6ZRK6 1079 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 FSIP1Q8NA03 581 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 NSUN4Q96CB9 384 aaKnown RBP15.13■□□□□ 0.01
SEC13-216ENST00000479868 ANAPC4Q9UJX5 808 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 CYP2D7A0A087X1C5 515 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
SEC13-216ENST00000479868 MECOMQ03112 1051 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 STK38Q15208 465 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 ADALQ6DHV7 355 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 SEPT12Q8IYM1 358 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 RGS22Q8NE09 1264 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 NID2Q14112 1375 aa15.13■□□□□ 0.01
SEC13-216ENST00000479868 YEATS4O95619 227 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 PRDX5P30044 214 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
SEC13-216ENST00000479868 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 CBX8Q9HC52 389 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 IRS2Q9Y4H2 1338 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 ERICH2A1L162 156 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 SPTLC2O15270 562 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 KCNG4Q8TDN1 519 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 MRPS27Q92552 414 aaKnown RBP15.12■□□□□ 0.01
SEC13-216ENST00000479868 BRIP1Q9BX63 1249 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 DNAJC25Q9H1X3 360 aa15.12■□□□□ 0.01
SEC13-216ENST00000479868 PDS5AQ29RF7 1337 aaKnown RBP15.12■□□□□ 0.01
SEC13-216ENST00000479868 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
SEC13-216ENST00000479868 A0A1B0GVL5 298 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 IFNAR1P17181 557 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 GUCY1A2P33402 732 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 SSRP1Q08945 709 aaKnown RBP15.11■□□□□ 0.01
SEC13-216ENST00000479868 ANO1Q5XXA6 986 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 MTA3Q9BTC8 594 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 STK36Q9NRP7 1315 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 A0A1W2PQ27 194 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 A0A1W2PQ64 194 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 A0A1W2PQD8 194 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 KINO60870 393 aaKnown RBP15.11■□□□□ 0.01
SEC13-216ENST00000479868 FMNL1O95466 1100 aaPredicted RBP15.11■□□□□ 0.01
SEC13-216ENST00000479868 HSPA1LP34931 641 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 SF3A1Q15459 793 aaKnown RBP15.11■□□□□ 0.01
SEC13-216ENST00000479868 RTN1Q16799 776 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 FMR1NBQ8N0W7 255 aaPredicted RBP15.11■□□□□ 0.01
SEC13-216ENST00000479868 ESR2Q92731 530 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 UBAC1Q9BSL1 405 aa15.11■□□□□ 0.01
SEC13-216ENST00000479868 AATFQ9NY61 560 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEC13-216ENST00000479868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.11■□□□□ 0.011e-11■□□□□ 8.3
SEC13-216ENST00000479868 TNKSO95271 1327 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 ZNF500O60304 480 aaPredicted RBP15.1■□□□□ 0.01
SEC13-216ENST00000479868 NDUFA8P51970 172 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 EVX2Q03828 476 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 SEC23AQ15436 765 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 CTR9Q6PD62 1173 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 CMTR1Q8N1G2 835 aaKnown RBP15.1■□□□□ 0.01
SEC13-216ENST00000479868 CNBD1Q8NA66 436 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 BCL11BQ9C0K0 894 aaPredicted RBP15.1■□□□□ 0.01
SEC13-216ENST00000479868 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.1■□□□□ 0.01
SEC13-216ENST00000479868 CTAGE5O15320 804 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 PRDM1O75626 825 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 ZNF165P49910 485 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 TMTC2Q8N394 836 aa15.1■□□□□ 0.01
SEC13-216ENST00000479868 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms