RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 BIN2Q9UBW5 565 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-211ENST00000479625 GABRQQ9UN88 632 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 NR2E3Q9Y5X4 410 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 LAMA2P24043 3122 aaKnown RBP12.34□□□□□ -0.43
GPNMB-211ENST00000479625 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
GPNMB-211ENST00000479625 VCANP13611 3396 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 HIBADHP31937 336 aaKnown RBP12.33□□□□□ -0.44
GPNMB-211ENST00000479625 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 ANKRD23Q86SG2 305 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 STAP2Q9UGK3 403 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.44
GPNMB-211ENST00000479625 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 F6X3S4 739 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 SNPHO15079 494 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 EVI5O60447 810 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 ELNP15502 786 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 UBXN2AP68543 259 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
GPNMB-211ENST00000479625 MOGSQ13724 837 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
GPNMB-211ENST00000479625 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
GPNMB-211ENST00000479625 SPTBN5Q9NRC6 3674 aaKnown RBP12.32□□□□□ -0.44
GPNMB-211ENST00000479625 CYP2C8P10632 490 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 HOXD10P28358 340 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 PPATQ06203 517 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 UBE4AQ14139 1066 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 Q7L0L9 218 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 PLXNB2O15031 1838 aa12.31□□□□□ -0.44
GPNMB-211ENST00000479625 FRMPD3Q5JV73 1810 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 SGPL1O95470 568 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 INHAP05111 366 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 BCRP11274 1271 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 FCGRTP55899 365 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 FAM83AQ86UY5 434 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 DIS3LQ8TF46 1054 aaKnown RBP12.3□□□□□ -0.44
GPNMB-211ENST00000479625 DEFB118Q96PH6 123 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 ZNF341Q9BYN7 854 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 KCNH4Q9UQ05 1017 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
GPNMB-211ENST00000479625 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
GPNMB-211ENST00000479625 ADCY3O60266 1144 aa12.29□□□□□ -0.44
GPNMB-211ENST00000479625 BEND3Q5T5X7 828 aa12.29□□□□□ -0.44
GPNMB-211ENST00000479625 DCAF15Q66K64 600 aa12.29□□□□□ -0.44
GPNMB-211ENST00000479625 APOBEC3HQ6NTF7 200 aaKnown RBP12.29□□□□□ -0.44
GPNMB-211ENST00000479625 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
GPNMB-211ENST00000479625 ZDHHC15Q96MV8 337 aa12.29□□□□□ -0.44
GPNMB-211ENST00000479625 PARK7Q99497 189 aaKnown RBP12.29□□□□□ -0.44
GPNMB-211ENST00000479625 GRM8O00222 908 aa12.28□□□□□ -0.44
GPNMB-211ENST00000479625 FLT3LGP49771 235 aa12.28□□□□□ -0.44
GPNMB-211ENST00000479625 HDLBPQ00341 1268 aaKnown RBP12.28□□□□□ -0.44
GPNMB-211ENST00000479625 C7orf61Q8IZ16 206 aa12.28□□□□□ -0.44
GPNMB-211ENST00000479625 DEFB123Q8N688 67 aa12.28□□□□□ -0.44
GPNMB-211ENST00000479625 PAWRQ96IZ0 340 aaKnown RBP12.28□□□□□ -0.44
GPNMB-211ENST00000479625 ZMYND8Q9ULU4 1186 aaPredicted RBP12.28□□□□□ -0.44
GPNMB-211ENST00000479625 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
GPNMB-211ENST00000479625 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
GPNMB-211ENST00000479625 FRAT2O75474 233 aaPredicted RBP12.27□□□□□ -0.45
GPNMB-211ENST00000479625 TFRCP02786 760 aaKnown RBP12.27□□□□□ -0.45
GPNMB-211ENST00000479625 TCP10Q12799 353 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 FKBP1CQ5VVH2 108 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 HOOK2Q96ED9 719 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 GDF15Q99988 308 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
GPNMB-211ENST00000479625 PRUNE2Q8WUY3 3088 aa12.27□□□□□ -0.45
GPNMB-211ENST00000479625 MAST2Q6P0Q8 1798 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 NFIAQ12857 509 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 TBC1D22AQ8WUA7 517 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 SUCLG2Q96I99 432 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 MFRPQ9BY79 579 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 PRKRIP1Q9H875 184 aaPredicted RBP12.26□□□□□ -0.45
GPNMB-211ENST00000479625 PAK6Q9NQU5 681 aaPredicted RBP12.26□□□□□ -0.45
GPNMB-211ENST00000479625 ZNF112Q9UJU3 913 aa12.26□□□□□ -0.45
GPNMB-211ENST00000479625 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
GPNMB-211ENST00000479625 SYN1P17600 705 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 BCAMP50895 628 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 NOL9Q5SY16 702 aaKnown RBP12.25□□□□□ -0.45
GPNMB-211ENST00000479625 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 FAM151AQ8WW52 585 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 COL25A1Q9BXS0 654 aaPredicted RBP12.25□□□□□ -0.45
GPNMB-211ENST00000479625 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 MAST3O60307 1309 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 MROH5Q6ZUA9 1318 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
GPNMB-211ENST00000479625 CDH23Q9H251 3354 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 SLURP2P0DP57 97 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 GADL1Q6ZQY3 521 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 NECAB2Q7Z6G3 386 aa12.24□□□□□ -0.45
GPNMB-211ENST00000479625 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms