RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 NBPF15Q8N660 670 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 UBXN4Q92575 508 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 NKX2-3Q8TAU0 364 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
LRRFIP1-211ENST00000478958 H0YHG0 523 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 ZNF213O14771 459 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 KIF3CO14782 793 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 SEC31AO94979 1220 aaKnown RBP12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 YEATS4O95619 227 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 ZAP70P43403 619 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 MNAT1P51948 309 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 ANTXR2P58335 489 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 MAP9Q49MG5 647 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 FOXP2O15409 715 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 ETF1P62495 437 aaKnown RBP12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 ALG1Q9BT22 464 aa12.64□□□□□ -0.39
LRRFIP1-211ENST00000478958 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 XAGE2Q96GT9 111 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 L2HGDHQ9H9P8 463 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 INCENPQ9NQS7 918 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 FANCLQ9NW38 375 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 H7C1W4 665 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 FANCGO15287 622 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 FOXN1O15353 648 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 CORO7P57737 925 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 CCDC57Q2TAC2 916 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 MPHOSPH10O00566 681 aaKnown RBP12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 GPAA1O43292 621 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 TPM1P09493 284 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 CMA1P23946 247 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
LRRFIP1-211ENST00000478958 ATP8B1O43520 1251 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 MRC1P22897 1456 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 SCP2P22307 547 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 MYL5Q02045 173 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 KRT40Q6A162 431 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 CCDC34Q96HJ3 373 aa12.62□□□□□ -0.39
LRRFIP1-211ENST00000478958 TTC36A6NLP5 189 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 ANKRD65E5RJM6 399 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 IDH1O75874 414 aaKnown RBP12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 ADKP55263 362 aaKnown RBP12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 TRMT44Q8IYL2 757 aaKnown RBP12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 ZNF526Q8TF50 670 aaPredicted RBP12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 B4E1Z4 1266 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 CPP00450 1065 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 CDC27P30260 824 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 ZKSCAN8Q15776 578 aaPredicted RBP12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 BPIFA3Q9BQP9 254 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 PCDHA5Q9Y5H7 936 aa12.61□□□□□ -0.39
LRRFIP1-211ENST00000478958 GNG11P61952 73 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 FOXP4Q8IVH2 680 aaPredicted RBP12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 EFCAB13Q8IY85 973 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 DESI2Q9BSY9 194 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 KLHL33A6NCF5 533 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 PDE4BQ07343 736 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 GIMAP7Q8NHV1 300 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 MEGF6O75095 1541 aa12.6□□□□□ -0.39
LRRFIP1-211ENST00000478958 EVCP57679 992 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 KARSQ15046 597 aaKnown RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 C11orf91Q3C1V1 193 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms