RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 GRM2Q14416 872 aa6.48□□□□□ -1.37
VLDLR-204ENST00000478776 KSR1Q8IVT5 923 aa6.48□□□□□ -1.37
VLDLR-204ENST00000478776 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.48□□□□□ -1.37
VLDLR-204ENST00000478776 DMRTB1Q96MA1 342 aa6.48□□□□□ -1.37
VLDLR-204ENST00000478776 SLC38A3Q99624 504 aa6.48□□□□□ -1.37
VLDLR-204ENST00000478776 MKNK2Q9HBH9 465 aa6.48□□□□□ -1.37
VLDLR-204ENST00000478776 ECM1Q16610 540 aa6.47□□□□□ -1.37
VLDLR-204ENST00000478776 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
VLDLR-204ENST00000478776 ANGEL2Q5VTE6 544 aaKnown RBP6.47□□□□□ -1.37
VLDLR-204ENST00000478776 EPS8L3Q8TE67 593 aaKnown RBP6.47□□□□□ -1.37
VLDLR-204ENST00000478776 CSRNP1Q96S65 589 aa6.47□□□□□ -1.37
VLDLR-204ENST00000478776 DUSP23Q9BVJ7 150 aa6.47□□□□□ -1.37
VLDLR-204ENST00000478776 MBNL3Q9NUK0 354 aaKnown RBP6.47□□□□□ -1.37
VLDLR-204ENST00000478776 LEFTY1O75610 366 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 CEACAM5P06731 702 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 RNASE1P07998 156 aaKnown RBP6.46□□□□□ -1.38
VLDLR-204ENST00000478776 XRCC5P13010 732 aaKnown RBP6.46□□□□□ -1.38
VLDLR-204ENST00000478776 ITIH2P19823 946 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 CD96P40200 585 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 ZNF124Q15973 351 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 CARMIL2Q6F5E8 1435 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 TMEM40Q8WWA1 233 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 ACSBG1Q96GR2 724 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 AKAP2Q9Y2D5 859 aa6.46□□□□□ -1.38
VLDLR-204ENST00000478776 GPR182O15218 404 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 WFDC3Q8IUB2 231 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 TOP6BLQ8N6T0 577 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 EMILIN2Q9BXX0 1053 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 CBX8Q9HC52 389 aa6.45□□□□□ -1.38
VLDLR-204ENST00000478776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
VLDLR-204ENST00000478776 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 ARNTP27540 789 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 OXCT1P55809 520 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 MAP1SQ66K74 1059 aaPredicted RBP6.44□□□□□ -1.38
VLDLR-204ENST00000478776 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 ISL2Q96A47 359 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 ADAMTS6Q9UKP5 1117 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 PCDHGC5Q9Y5F6 944 aa6.44□□□□□ -1.38
VLDLR-204ENST00000478776 SLC23A3Q6PIS1 610 aa6.43□□□□□ -1.38
VLDLR-204ENST00000478776 CCER1Q8TC90 406 aaPredicted RBP6.43□□□□□ -1.38
VLDLR-204ENST00000478776 ASB11Q8WXH4 323 aa6.43□□□□□ -1.38
VLDLR-204ENST00000478776 ALKBH8Q96BT7 664 aaKnown RBP6.43□□□□□ -1.38
VLDLR-204ENST00000478776 BCO2Q9BYV7 579 aa6.43□□□□□ -1.38
VLDLR-204ENST00000478776 SNX11Q9Y5W9 270 aa6.43□□□□□ -1.38
VLDLR-204ENST00000478776 NEFMP07197 916 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 NME2P22392 152 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 ERVK-24P63145 666 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 PDE4CQ08493 712 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 ZC3H12AQ5D1E8 599 aaKnown RBP6.42□□□□□ -1.38
VLDLR-204ENST00000478776 PDZD3Q86UT5 571 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 RBCK1Q9BYM8 510 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 PLAGL2Q9UPG8 496 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 SAMM50Q9Y512 469 aa6.42□□□□□ -1.38
VLDLR-204ENST00000478776 IKZF1Q13422 519 aa6.41□□□□□ -1.38
VLDLR-204ENST00000478776 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
VLDLR-204ENST00000478776 GPBAR1Q8TDU6 330 aa6.41□□□□□ -1.38
VLDLR-204ENST00000478776 FAM53CQ9NYF3 392 aa6.41□□□□□ -1.38
VLDLR-204ENST00000478776 U3KQE9 123 aa6.41□□□□□ -1.38
VLDLR-204ENST00000478776 LRRC10BA6NIK2 292 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 GNAT3A8MTJ3 354 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 KCNMB1Q16558 191 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 PI16Q6UXB8 463 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 TXNDC2Q86VQ3 553 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 ZSWIM9Q86XI8 627 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 STK35Q8TDR2 534 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 FAM84AQ96KN4 292 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 PRDM10Q9NQV6 1147 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 CSADQ9Y600 493 aa6.4□□□□□ -1.38
VLDLR-204ENST00000478776 IGHA2P01877 340 aa6.39□□□□□ -1.39
VLDLR-204ENST00000478776 ZP2Q05996 745 aa6.39□□□□□ -1.39
VLDLR-204ENST00000478776 PPM1JQ5JR12 505 aa6.39□□□□□ -1.39
VLDLR-204ENST00000478776 NXPE4Q6UWF7 544 aa6.39□□□□□ -1.39
VLDLR-204ENST00000478776 HEXIM2Q96MH2 286 aaKnown RBP6.39□□□□□ -1.39
VLDLR-204ENST00000478776 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
VLDLR-204ENST00000478776 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
VLDLR-204ENST00000478776 BIN2Q9UBW5 565 aaPredicted RBP6.39□□□□□ -1.39
VLDLR-204ENST00000478776 IGF2BP3O00425 579 aaKnown RBP eCLIP6.38□□□□□ -1.39
VLDLR-204ENST00000478776 PLCB3Q01970 1234 aa6.38□□□□□ -1.39
VLDLR-204ENST00000478776 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.38□□□□□ -1.39
VLDLR-204ENST00000478776 FLAD1Q8NFF5 587 aa6.38□□□□□ -1.39
VLDLR-204ENST00000478776 CEP44Q9C0F1 390 aa6.38□□□□□ -1.39
VLDLR-204ENST00000478776 PNMA6FA0A0J9YX94 578 aa6.37□□□□□ -1.39
VLDLR-204ENST00000478776 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
VLDLR-204ENST00000478776 AFMP43652 599 aa6.37□□□□□ -1.39
VLDLR-204ENST00000478776 MLANAQ16655 118 aa6.37□□□□□ -1.39
VLDLR-204ENST00000478776 TMC7Q7Z402 723 aa6.37□□□□□ -1.39
VLDLR-204ENST00000478776 KCT2Q8NC54 265 aa6.37□□□□□ -1.39
VLDLR-204ENST00000478776 FANCGO15287 622 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 GSTT1P30711 240 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 ZNF252P-AS1Q0IIN9 211 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 LRRC14Q15048 493 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 FBLN7Q53RD9 439 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 TPTE2Q6XPS3 522 aa6.36□□□□□ -1.39
VLDLR-204ENST00000478776 C12orf40Q86WS4 652 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms