RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 HMGCRP04035 888 aa18.12■□□□□ 0.49
USP11-207ENST00000478596 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
USP11-207ENST00000478596 COA7Q96BR5 231 aa18.12■□□□□ 0.49
USP11-207ENST00000478596 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
USP11-207ENST00000478596 RAPGEFL1Q9UHV5 662 aa18.12■□□□□ 0.49
USP11-207ENST00000478596 PFASO15067 1338 aa18.12■□□□□ 0.49
USP11-207ENST00000478596 MDM2Q00987 491 aaPredicted RBP18.11■□□□□ 0.49
USP11-207ENST00000478596 GCKRQ14397 625 aa18.11■□□□□ 0.49
USP11-207ENST00000478596 FASTKD5Q7L8L6 764 aaKnown RBP18.11■□□□□ 0.49
USP11-207ENST00000478596 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
USP11-207ENST00000478596 FAM122AQ96E09 287 aa18.11■□□□□ 0.49
USP11-207ENST00000478596 ZDHHC15Q96MV8 337 aa18.11■□□□□ 0.49
USP11-207ENST00000478596 MRIQ9BWK5 157 aa18.11■□□□□ 0.49
USP11-207ENST00000478596 TAOK2Q9UL54 1235 aa18.11■□□□□ 0.49
USP11-207ENST00000478596 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
USP11-207ENST00000478596 COL6A1P12109 1028 aa18.1■□□□□ 0.49
USP11-207ENST00000478596 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
USP11-207ENST00000478596 GRIK5Q16478 980 aa18.1■□□□□ 0.49
USP11-207ENST00000478596 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
USP11-207ENST00000478596 DDX60LQ5H9U9 1706 aaKnown RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 PTPRCP08575 1304 aa18.09■□□□□ 0.49
USP11-207ENST00000478596 A0A0G2JLL6 359 aaPredicted RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 APOBEC3HQ6NTF7 200 aaKnown RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 G2E3Q7L622 706 aa18.09■□□□□ 0.49
USP11-207ENST00000478596 PRRT2Q7Z6L0 340 aaPredicted RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 SEMA6BQ9H3T3 888 aa18.09■□□□□ 0.49
USP11-207ENST00000478596 NOB1Q9ULX3 412 aaKnown RBP18.09■□□□□ 0.49
USP11-207ENST00000478596 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
USP11-207ENST00000478596 TJAP1Q5JTD0 557 aa18.08■□□□□ 0.48
USP11-207ENST00000478596 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.48
USP11-207ENST00000478596 SMCR8Q8TEV9 937 aaPredicted RBP18.08■□□□□ 0.48
USP11-207ENST00000478596 FAM84BQ96KN1 310 aaPredicted RBP18.08■□□□□ 0.48
USP11-207ENST00000478596 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.48
USP11-207ENST00000478596 GYG1P46976 350 aa18.07■□□□□ 0.48
USP11-207ENST00000478596 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
USP11-207ENST00000478596 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
USP11-207ENST00000478596 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
USP11-207ENST00000478596 FAM151AQ8WW52 585 aa18.06■□□□□ 0.48
USP11-207ENST00000478596 PLIN1O60240 522 aa18.05■□□□□ 0.48
USP11-207ENST00000478596 RRP1P56182 461 aaKnown RBP18.05■□□□□ 0.48
USP11-207ENST00000478596 TRIM32Q13049 653 aa18.05■□□□□ 0.48
USP11-207ENST00000478596 FAM110CQ1W6H9 321 aa18.05■□□□□ 0.48
USP11-207ENST00000478596 LRRC26Q2I0M4 334 aa18.05■□□□□ 0.48
USP11-207ENST00000478596 MYLIPQ8WY64 445 aa18.05■□□□□ 0.48
USP11-207ENST00000478596 LBHD1Q9BQE6 289 aaPredicted RBP18.05■□□□□ 0.48
USP11-207ENST00000478596 GJD2Q9UKL4 321 aa18.05■□□□□ 0.48
USP11-207ENST00000478596 FOXO4P98177 505 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 MAP3K21Q5TCX8 1036 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 ATF7IPQ6VMQ6 1270 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 LDHAL6AQ6ZMR3 332 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 ANKRD13CQ8N6S4 541 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 AFG3L2Q9Y4W6 797 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 ZHX2Q9Y6X8 837 aa18.04■□□□□ 0.48
USP11-207ENST00000478596 F6X3S4 739 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 MS4A1P11836 297 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 FOSL2P15408 326 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 HHIPL2Q6UWX4 724 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 GADL1Q6ZQY3 521 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 SUGT1Q9Y2Z0 365 aa18.03■□□□□ 0.48
USP11-207ENST00000478596 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
USP11-207ENST00000478596 MAST3O60307 1309 aa18.02■□□□□ 0.48
USP11-207ENST00000478596 PTPRAP18433 802 aa18.02■□□□□ 0.48
USP11-207ENST00000478596 FBXO33Q7Z6M2 555 aa18.02■□□□□ 0.48
USP11-207ENST00000478596 TTYH1Q9H313 450 aaPredicted RBP18.02■□□□□ 0.48
USP11-207ENST00000478596 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
USP11-207ENST00000478596 TMEM265A0A087WTH1 108 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 TRIM27P14373 513 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 SCYL3Q8IZE3 742 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 LINS1Q8NG48 757 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 TRIB2Q92519 343 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 PICK1Q9NRD5 415 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
USP11-207ENST00000478596 PHF20L1A8MW92 1017 aa18■□□□□ 0.47
USP11-207ENST00000478596 NEFLP07196 543 aa18■□□□□ 0.47
USP11-207ENST00000478596 PRKAR2AP13861 404 aaKnown RBP18■□□□□ 0.47
USP11-207ENST00000478596 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
USP11-207ENST00000478596 CHAF1AQ13111 956 aaPredicted RBP18■□□□□ 0.47
USP11-207ENST00000478596 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
USP11-207ENST00000478596 ITPRIPQ8IWB1 547 aa18■□□□□ 0.47
USP11-207ENST00000478596 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
USP11-207ENST00000478596 ZNF594Q96JF6 807 aaPredicted RBP18■□□□□ 0.47
USP11-207ENST00000478596 CHMP3Q9Y3E7 222 aa18■□□□□ 0.47
USP11-207ENST00000478596 MAP3K12Q12852 859 aa17.99■□□□□ 0.47
USP11-207ENST00000478596 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
USP11-207ENST00000478596 VPS37DQ86XT2 251 aa17.99■□□□□ 0.47
USP11-207ENST00000478596 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
USP11-207ENST00000478596 GCLCP48506 637 aaPredicted RBP17.98■□□□□ 0.47
USP11-207ENST00000478596 TCP10Q12799 353 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 LHX8Q68G74 356 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 SRCIN1Q9C0H9 1055 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 IQSEC3Q9UPP2 1182 aaPredicted RBP17.98■□□□□ 0.47
USP11-207ENST00000478596 TNNQ9UQP3 1299 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 DNAH12Q6ZR08 3092 aa17.98■□□□□ 0.47
USP11-207ENST00000478596 XRCC5P13010 732 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms