RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 IDI2Q9BXS1 227 aa32.42■■■□□ 2.78
CCM2-211ENST00000478582 ANGEL1Q9UNK9 670 aaKnown RBP32.42■■■□□ 2.78
CCM2-211ENST00000478582 TCRBV5S4A2TA0A5A2 114 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 TCP10L2B9ZVM9 353 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 PPP1R12BO60237 982 aaPredicted RBP32.41■■■□□ 2.78
CCM2-211ENST00000478582 ADD2P35612 726 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 CACNB3P54284 484 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 MAP3K11Q16584 847 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 NBPF12Q5TAG4 269 aaPredicted RBP32.41■■■□□ 2.78
CCM2-211ENST00000478582 CERS3Q8IU89 383 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 TNS4Q8IZW8 715 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 PPP4R2Q9NY27 417 aa32.41■■■□□ 2.78
CCM2-211ENST00000478582 PLCG2P16885 1265 aa32.4■■■□□ 2.78
CCM2-211ENST00000478582 ZNF532Q9HCE3 1301 aa32.4■■■□□ 2.78
CCM2-211ENST00000478582 UBE3CQ15386 1083 aa32.39■■■□□ 2.78
CCM2-211ENST00000478582 REM2Q8IYK8 340 aaPredicted RBP32.39■■■□□ 2.78
CCM2-211ENST00000478582 CSRNP1Q96S65 589 aa32.39■■■□□ 2.78
CCM2-211ENST00000478582 AATFQ9NY61 560 aaKnown RBP eCLIP32.39■■■□□ 2.78
CCM2-211ENST00000478582 FZD1Q9UP38 647 aa32.39■■■□□ 2.78
CCM2-211ENST00000478582 RFX7Q2KHR2 1363 aa32.39■■■□□ 2.78
CCM2-211ENST00000478582 SSC5DA1L4H1 1573 aa32.39■■■□□ 2.78
CCM2-211ENST00000478582 NPM3O75607 178 aaKnown RBP32.38■■■□□ 2.77
CCM2-211ENST00000478582 WDHD1O75717 1129 aaPredicted RBP32.37■■■□□ 2.77
CCM2-211ENST00000478582 NFIAQ12857 509 aa32.37■■■□□ 2.77
CCM2-211ENST00000478582 FAM151AQ8WW52 585 aa32.37■■■□□ 2.77
CCM2-211ENST00000478582 EVI5LQ96CN4 794 aa32.37■■■□□ 2.77
CCM2-211ENST00000478582 TEPSINQ96N21 525 aa32.37■■■□□ 2.77
CCM2-211ENST00000478582 FAM198AQ9UFP1 575 aa32.37■■■□□ 2.77
CCM2-211ENST00000478582 ENTPD3O75355 529 aa32.36■■■□□ 2.77
CCM2-211ENST00000478582 LRRFIP1Q32MZ4 808 aaKnown RBP32.36■■■□□ 2.77
CCM2-211ENST00000478582 TSKSQ9UJT2 592 aa32.36■■■□□ 2.77
CCM2-211ENST00000478582 UNCXA6NJT0 531 aa32.35■■■□□ 2.77
CCM2-211ENST00000478582 ZFYP08048 801 aaPredicted RBP32.35■■■□□ 2.77
CCM2-211ENST00000478582 TICAM2Q86XR7 235 aa32.35■■■□□ 2.77
CCM2-211ENST00000478582 SH3RF3Q8TEJ3 882 aaPredicted RBP32.35■■■□□ 2.77
CCM2-211ENST00000478582 TMEM39BQ9GZU3 492 aa32.35■■■□□ 2.77
CCM2-211ENST00000478582 RPAP1Q9BWH6 1393 aaPredicted RBP32.34■■■□□ 2.77
CCM2-211ENST00000478582 USP2O75604 605 aaPredicted RBP32.34■■■□□ 2.77
CCM2-211ENST00000478582 DYNLL1P63167 89 aaKnown RBP32.34■■■□□ 2.77
CCM2-211ENST00000478582 MIGA1Q8NAN2 632 aa32.34■■■□□ 2.77
CCM2-211ENST00000478582 RIOK1Q9BRS2 568 aaKnown RBP32.34■■■□□ 2.77
CCM2-211ENST00000478582 RNF113AO15541 343 aaKnown RBP32.33■■■□□ 2.77
CCM2-211ENST00000478582 RGS3P49796 1198 aa32.33■■■□□ 2.77
CCM2-211ENST00000478582 TEX11Q8IYF3 940 aa32.33■■■□□ 2.77
CCM2-211ENST00000478582 MAGEB6P1A0A0J9YX57 407 aa32.32■■■□□ 2.76
CCM2-211ENST00000478582 IREB2P48200 963 aaKnown RBP32.32■■■□□ 2.76
CCM2-211ENST00000478582 SLC10A4Q96EP9 437 aa32.32■■■□□ 2.76
CCM2-211ENST00000478582 FSD1Q9BTV5 496 aa32.32■■■□□ 2.76
CCM2-211ENST00000478582 DDX4Q9NQI0 724 aaKnown RBP32.32■■■□□ 2.76
CCM2-211ENST00000478582 SAGE1Q9NXZ1 904 aa32.32■■■□□ 2.76
CCM2-211ENST00000478582 MYH7P12883 1935 aa32.32■■■□□ 2.76
CCM2-211ENST00000478582 CHGBP05060 677 aa32.31■■■□□ 2.76
CCM2-211ENST00000478582 TCP10Q12799 353 aa32.31■■■□□ 2.76
CCM2-211ENST00000478582 SLFNL1Q499Z3 407 aa32.31■■■□□ 2.76
CCM2-211ENST00000478582 RNF186Q9NXI6 227 aa32.31■■■□□ 2.76
CCM2-211ENST00000478582 CDAN1Q8IWY9 1227 aa32.3■■■□□ 2.76
CCM2-211ENST00000478582 SPRYD7Q5W111 196 aa32.29■■■□□ 2.76
CCM2-211ENST00000478582 ZFPM1Q8IX07 1006 aa32.29■■■□□ 2.76
CCM2-211ENST00000478582 APPBP2Q92624 585 aa32.29■■■□□ 2.76
CCM2-211ENST00000478582 TRIM6-TRIM34B2RNG4 842 aa32.28■■■□□ 2.76
CCM2-211ENST00000478582 TRPA1O75762 1119 aa32.28■■■□□ 2.76
CCM2-211ENST00000478582 PICALMQ13492 652 aa32.28■■■□□ 2.76
CCM2-211ENST00000478582 TTC22Q5TAA0 569 aa32.28■■■□□ 2.76
CCM2-211ENST00000478582 ANKRD13AQ8IZ07 590 aa32.28■■■□□ 2.76
CCM2-211ENST00000478582 CLMNQ96JQ2 1002 aa32.28■■■□□ 2.76
CCM2-211ENST00000478582 TM4SF4P48230 202 aa32.27■■■□□ 2.76
CCM2-211ENST00000478582 MKRN3Q13064 507 aaKnown RBP32.27■■■□□ 2.76
CCM2-211ENST00000478582 TGFBRAP1Q8WUH2 860 aa32.27■■■□□ 2.76
CCM2-211ENST00000478582 HOOK2Q96ED9 719 aa32.27■■■□□ 2.76
CCM2-211ENST00000478582 PUS7LQ9H0K6 701 aaKnown RBP32.27■■■□□ 2.76
CCM2-211ENST00000478582 COL2A1P02458 1487 aaPredicted RBP32.27■■■□□ 2.76
CCM2-211ENST00000478582 LCORLQ8N3X6 602 aa32.26■■■□□ 2.75
CCM2-211ENST00000478582 OSBPL5Q9H0X9 879 aaPredicted RBP32.26■■■□□ 2.75
CCM2-211ENST00000478582 ATRNL1Q5VV63 1379 aa32.26■■■□□ 2.75
CCM2-211ENST00000478582 ZMYM1Q5SVZ6 1142 aa32.25■■■□□ 2.75
CCM2-211ENST00000478582 SH3BP5LQ7L8J4 393 aa32.25■■■□□ 2.75
CCM2-211ENST00000478582 OSBP2Q969R2 916 aa32.25■■■□□ 2.75
CCM2-211ENST00000478582 RILPL2Q969X0 211 aa32.25■■■□□ 2.75
CCM2-211ENST00000478582 CRNKL1Q9BZJ0 848 aaKnown RBP32.25■■■□□ 2.75
CCM2-211ENST00000478582 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.25■■■□□ 2.75
CCM2-211ENST00000478582 MBD4O95243 580 aa32.24■■■□□ 2.75
CCM2-211ENST00000478582 ARMT1Q9H993 441 aa32.24■■■□□ 2.75
CCM2-211ENST00000478582 FLT1P17948 1338 aa32.24■■■□□ 2.75
CCM2-211ENST00000478582 ZBTB48P10074 688 aaPredicted RBP32.23■■■□□ 2.75
CCM2-211ENST00000478582 GSPT1P15170 499 aaKnown RBP32.23■■■□□ 2.75
CCM2-211ENST00000478582 SREBF2Q12772 1141 aa32.23■■■□□ 2.75
CCM2-211ENST00000478582 WNK4Q96J92 1243 aa32.23■■■□□ 2.75
CCM2-211ENST00000478582 FOCADQ5VW36 1801 aa32.22■■■□□ 2.75
CCM2-211ENST00000478582 CASP8AP2Q9UKL3 1982 aa32.22■■■□□ 2.75
CCM2-211ENST00000478582 DDTLA6NHG4 134 aaPredicted RBP32.22■■■□□ 2.75
CCM2-211ENST00000478582 USP5P45974 858 aa32.22■■■□□ 2.75
CCM2-211ENST00000478582 MAP3K9P80192 1104 aa32.22■■■□□ 2.75
CCM2-211ENST00000478582 MAPKAPK5Q8IW41 473 aa32.22■■■□□ 2.75
CCM2-211ENST00000478582 DHX36Q9H2U1 1008 aaKnown RBP32.22■■■□□ 2.75
CCM2-211ENST00000478582 CDK5RAP2Q96SN8 1893 aa32.22■■■□□ 2.75
CCM2-211ENST00000478582 ZSCAN29Q8IWY8 852 aaPredicted RBP32.21■■■□□ 2.75
CCM2-211ENST00000478582 STRBPQ96SI9 672 aaKnown RBP32.21■■■□□ 2.75
CCM2-211ENST00000478582 MANSC4A6NHS7 340 aaPredicted RBP32.2■■■□□ 2.75
CCM2-211ENST00000478582 INHBEP58166 350 aa32.2■■■□□ 2.75
CCM2-211ENST00000478582 MAP3K10Q02779 954 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms