RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 CAVIN2O95810 425 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SERPINB2P05120 415 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FGRP09769 529 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 IFNAR1P17181 557 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 GSTO1P78417 241 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 MECOMQ03112 1051 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 MICU3Q86XE3 530 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TRIM22Q8IYM9 498 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 KCNG4Q8TDN1 519 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FUCA2Q9BTY2 467 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TNMDQ9H2S6 317 aa14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ARPP21Q9UBL0 812 aaPredicted RBP14.52□□□□□ -0.09
TRAF3IP3-213ENST00000478359 BRWD3Q6RI45 1802 aa14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ATP2B4P23634 1241 aa14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RBM43Q6ZSC3 357 aaKnown RBP14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 IQCA1Q86XH1 822 aa14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ALG1Q9BT22 464 aa14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 DACT1Q9NYF0 836 aa14.51□□□□□ -0.09
TRAF3IP3-213ENST00000478359 MINDY4BA8MYZ0 360 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 NTRK3Q16288 839 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SBK1Q52WX2 424 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TDRD7Q8NHU6 1098 aaKnown RBP14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 PGBD1Q96JS3 809 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 USP28Q96RU2 1077 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CLSTN2Q9H4D0 955 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TFCP2L1Q9NZI6 479 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FMNL1O95466 1100 aaPredicted RBP14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 LDHCP07864 332 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CALM1P0DP23 149 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CALM2P0DP24 149 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CALM3P0DP25 149 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 HOXA10P31260 410 aaPredicted RBP14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ZNF772Q68DY9 489 aaPredicted RBP14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ADALQ6DHV7 355 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CCDC73Q6ZRK6 1079 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CRAMP1Q96RY5 1269 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 LAMB1P07942 1786 aa14.5□□□□□ -0.09
TRAF3IP3-213ENST00000478359 A0A1W2PQ27 194 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 A0A1W2PQ64 194 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 A0A1W2PQD8 194 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 KLRG2A4D1S0 409 aaPredicted RBP14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 BAG3O95817 575 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 LDHBP07195 334 aaKnown RBP14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 LIG1P18858 919 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CDC27P30260 824 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RTN1Q16799 776 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CCDC24Q8N4L8 307 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RNF214Q8ND24 703 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FLAD1Q8NFF5 587 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 NOL10Q9BSC4 688 aaKnown RBP14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 PODXL2Q9NZ53 605 aa14.49□□□□□ -0.09
TRAF3IP3-213ENST00000478359 WTIPA6NIX2 430 aaPredicted RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ESPNB1AK53 854 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 PLSCR1O15162 318 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ORC4O43929 436 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TRIM37O94972 964 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 DEXIO95424 95 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 KLRK1P26718 216 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ME1P48163 572 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RBM6P78332 1123 aaKnown RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 GUCY1B3Q02153 619 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 PDE4BQ07343 736 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CHAF1AQ13111 956 aaPredicted RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 GNL2Q13823 731 aaKnown RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TXNRD1Q16881 649 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 AMOTL1Q8IY63 956 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 PRDX5P30044 214 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FOSBP53539 338 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 DYNLL1P63167 89 aaKnown RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FAM160A1Q05DH4 1040 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 STK38Q15208 465 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SAFBQ15424 915 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SF3A1Q15459 793 aaKnown RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TPRNQ4KMQ1 711 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CTR9Q6PD62 1173 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ZNF654Q8IZM8 581 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 JMYQ8N9B5 988 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 LINC00301Q8NCQ3 95 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ZNF384Q8TF68 577 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 ZSCAN10Q96SZ4 725 aaPredicted RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 DCP1AQ9NPI6 582 aaPredicted RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 RBM28Q9NW13 759 aaKnown RBP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 AATFQ9NY61 560 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 GGA1Q9UJY5 639 aa14.48□□□□□ -0.09
TRAF3IP3-213ENST00000478359 TNKSO95271 1327 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 DLEC1Q9Y238 1755 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 XBP1P17861 261 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SEC23AQ15436 765 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CCDC178Q5BJE1 867 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 KRT40Q6A162 431 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SASS6Q6UVJ0 657 aa14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 CCAR1Q8IX12 1150 aaKnown RBP14.47□□□□□ -0.09
TRAF3IP3-213ENST00000478359 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms