RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 NSUN4Q96CB9 384 aaKnown RBP16.92■□□□□ 0.3
RCC1-211ENST00000478232 LRP2BPQ9P2M1 347 aa16.92■□□□□ 0.3
RCC1-211ENST00000478232 IGSF3O75054 1194 aa16.91■□□□□ 0.3
RCC1-211ENST00000478232 MCAMP43121 646 aa16.91■□□□□ 0.3
RCC1-211ENST00000478232 RHBDL3P58872 404 aa16.91■□□□□ 0.3
RCC1-211ENST00000478232 TTC39AQ5SRH9 613 aa16.91■□□□□ 0.3
RCC1-211ENST00000478232 ZNF384Q8TF68 577 aa16.91■□□□□ 0.3
RCC1-211ENST00000478232 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
RCC1-211ENST00000478232 LAMB1P07942 1786 aa16.91■□□□□ 0.3
RCC1-211ENST00000478232 PHF20L1A8MW92 1017 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 BTBD19C9JJ37 291 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 SOX10P56693 466 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 SH3BP5LQ7L8J4 393 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.9■□□□□ 0.3
RCC1-211ENST00000478232 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 DBNDD2Q9BQY9 259 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 EFCC1Q9HA90 598 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 KCNH4Q9UQ05 1017 aa16.9■□□□□ 0.3
RCC1-211ENST00000478232 OTOFQ9HC10 1997 aa16.89■□□□□ 0.3
RCC1-211ENST00000478232 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
RCC1-211ENST00000478232 CXCL11O14625 94 aa16.89■□□□□ 0.29
RCC1-211ENST00000478232 TLR2O60603 784 aa16.89■□□□□ 0.29
RCC1-211ENST00000478232 PICALMQ13492 652 aa16.89■□□□□ 0.29
RCC1-211ENST00000478232 CEP85Q6P2H3 762 aa16.89■□□□□ 0.29
RCC1-211ENST00000478232 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
RCC1-211ENST00000478232 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
RCC1-211ENST00000478232 PTPN22Q9Y2R2 807 aa16.89■□□□□ 0.29
RCC1-211ENST00000478232 TBC1D12O60347 775 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 SCYL3Q8IZE3 742 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
RCC1-211ENST00000478232 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 RFX7Q2KHR2 1363 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 ATRNL1Q5VV63 1379 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
RCC1-211ENST00000478232 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
RCC1-211ENST00000478232 BAG3O95817 575 aa16.87■□□□□ 0.29
RCC1-211ENST00000478232 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
RCC1-211ENST00000478232 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
RCC1-211ENST00000478232 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
RCC1-211ENST00000478232 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
RCC1-211ENST00000478232 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
RCC1-211ENST00000478232 PLCG2P16885 1265 aa16.86■□□□□ 0.29
RCC1-211ENST00000478232 PPP4CP60510 307 aa16.86■□□□□ 0.29
RCC1-211ENST00000478232 KIF22Q14807 665 aa16.86■□□□□ 0.29
RCC1-211ENST00000478232 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
RCC1-211ENST00000478232 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
RCC1-211ENST00000478232 DBNLQ9UJU6 430 aaKnown RBP16.86■□□□□ 0.29
RCC1-211ENST00000478232 ZHX2Q9Y6X8 837 aa16.86■□□□□ 0.29
RCC1-211ENST00000478232 PDHXO00330 501 aa16.85■□□□□ 0.29
RCC1-211ENST00000478232 PTPRAP18433 802 aa16.85■□□□□ 0.29
RCC1-211ENST00000478232 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
RCC1-211ENST00000478232 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
RCC1-211ENST00000478232 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
RCC1-211ENST00000478232 DDX19BQ9UMR2 479 aa16.85■□□□□ 0.29
RCC1-211ENST00000478232 AK9Q5TCS8 1911 aa16.85■□□□□ 0.29
RCC1-211ENST00000478232 GNRH1P01148 92 aa16.84■□□□□ 0.29
RCC1-211ENST00000478232 ZAP70P43403 619 aa16.84■□□□□ 0.29
RCC1-211ENST00000478232 MOGSQ13724 837 aa16.84■□□□□ 0.29
RCC1-211ENST00000478232 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
RCC1-211ENST00000478232 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
RCC1-211ENST00000478232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.84■□□□□ 0.29
RCC1-211ENST00000478232 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
RCC1-211ENST00000478232 AFG3L2Q9Y4W6 797 aa16.84■□□□□ 0.29
RCC1-211ENST00000478232 LACTBP83111 547 aaPredicted RBP16.83■□□□□ 0.28
RCC1-211ENST00000478232 CAP1Q01518 475 aa16.83■□□□□ 0.28
RCC1-211ENST00000478232 SH3RF3Q8TEJ3 882 aaPredicted RBP16.83■□□□□ 0.28
RCC1-211ENST00000478232 DHX36Q9H2U1 1008 aaKnown RBP16.83■□□□□ 0.28
RCC1-211ENST00000478232 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
RCC1-211ENST00000478232 AATFQ9NY61 560 aaKnown RBP eCLIP16.83■□□□□ 0.28
RCC1-211ENST00000478232 TLR7Q9NYK1 1049 aaKnown RBP16.83■□□□□ 0.28
RCC1-211ENST00000478232 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
RCC1-211ENST00000478232 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.28
RCC1-211ENST00000478232 A0A0G2JLL6 359 aaPredicted RBP16.82■□□□□ 0.28
RCC1-211ENST00000478232 HMMRO75330 724 aa16.82■□□□□ 0.28
RCC1-211ENST00000478232 SLURP2P0DP57 97 aa16.82■□□□□ 0.28
RCC1-211ENST00000478232 GPAT2Q6NUI2 795 aa16.82■□□□□ 0.28
RCC1-211ENST00000478232 PRRT2Q7Z6L0 340 aaPredicted RBP16.82■□□□□ 0.28
RCC1-211ENST00000478232 AACSQ86V21 672 aa16.82■□□□□ 0.28
RCC1-211ENST00000478232 ARMC5Q96C12 935 aa16.82■□□□□ 0.28
RCC1-211ENST00000478232 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
RCC1-211ENST00000478232 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
RCC1-211ENST00000478232 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
RCC1-211ENST00000478232 COL2A1P02458 1487 aaPredicted RBP16.81■□□□□ 0.28
RCC1-211ENST00000478232 PRMT2P55345 433 aa16.81■□□□□ 0.28
RCC1-211ENST00000478232 TMED8Q6PL24 325 aaPredicted RBP16.81■□□□□ 0.28
RCC1-211ENST00000478232 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
RCC1-211ENST00000478232 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
RCC1-211ENST00000478232 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
RCC1-211ENST00000478232 PARK7Q99497 189 aaKnown RBP16.81■□□□□ 0.28
RCC1-211ENST00000478232 CPA4Q9UI42 421 aa16.81■□□□□ 0.28
RCC1-211ENST00000478232 CYP7A1P22680 504 aa16.8■□□□□ 0.28
RCC1-211ENST00000478232 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
RCC1-211ENST00000478232 CERS3Q8IU89 383 aa16.8■□□□□ 0.28
RCC1-211ENST00000478232 CLASRPQ8N2M8 674 aaKnown RBP16.8■□□□□ 0.28
RCC1-211ENST00000478232 TGFBRAP1Q8WUH2 860 aa16.8■□□□□ 0.28
RCC1-211ENST00000478232 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
RCC1-211ENST00000478232 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
RCC1-211ENST00000478232 SLC45A1Q9Y2W3 748 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms