RNA–Protein interactions for RNA: ENST00000477909.5

NXPE3-203, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-203ENST00000477909 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
NXPE3-203ENST00000477909 NUTM2AQ8IVF1 878 aaPredicted RBP8.51□□□□□ -1.05
NXPE3-203ENST00000477909 MIGA1Q8NAN2 632 aa8.51□□□□□ -1.05
NXPE3-203ENST00000477909 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
NXPE3-203ENST00000477909 TSPYL1Q9H0U9 437 aa8.51□□□□□ -1.05
NXPE3-203ENST00000477909 EPB41L4AQ9HCS5 686 aaPredicted RBP8.51□□□□□ -1.05
NXPE3-203ENST00000477909 MARCKSP29966 332 aaPredicted RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 UBE3CQ15386 1083 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 NFXL1Q6ZNB6 911 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 FBXL16Q8N461 479 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 LINC00301Q8NCQ3 95 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 TDRD7Q8NHU6 1098 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 AK7Q96M32 723 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 PAXBP1Q9Y5B6 917 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 LTBP1Q14766 1721 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 SMIM22K7EJ46 135 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 SH2B2O14492 632 aaPredicted RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 KCNQ2O43526 872 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 TNNT3P45378 269 aaPredicted RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 METAP2P50579 478 aaKnown RBP eCLIP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 FAM160A1Q05DH4 1040 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 IQCB1Q15051 598 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 DDB1Q16531 1140 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 ISM2Q6H9L7 571 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 UTP14AQ9BVJ6 771 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 TOMM22Q9NS69 142 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 RTEL1Q9NZ71 1219 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 ANGEL1Q9UNK9 670 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 BIN1O00499 593 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 SLC5A1P13866 664 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 HNRNPH2P55795 449 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 ARID5BQ14865 1188 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 CCDC144BQ3MJ40 725 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 PLA2G4DQ86XP0 818 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 IFNL3Q8IZI9 196 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 MRPS27Q92552 414 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 SDF4Q9BRK5 362 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 NOL10Q9BSC4 688 aaKnown RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 ALG1Q9BT22 464 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 ZSWIM5Q9P217 1185 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 FEZ2Q9UHY8 353 aaPredicted RBP8.5□□□□□ -1.05
NXPE3-203ENST00000477909 COL4A1P02462 1669 aa8.5□□□□□ -1.05
NXPE3-203ENST00000477909 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 CAMTA2O94983 1202 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 UQCRFS1P1P0C7P4 283 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 KIF23Q02241 960 aaPredicted RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 FBXO38Q6PIJ6 1188 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 APOA5Q6Q788 366 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 FMR1NBQ8N0W7 255 aaPredicted RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 CMTR1Q8N1G2 835 aaKnown RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 DUOX1Q9NRD9 1551 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 MROH5Q6ZUA9 1318 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 LOC102724428A0A0B4J2F2 783 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 GOLGA6L19H0YKK7 550 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 SPTLC2O15270 562 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 SIK1P57059 783 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 ELF2Q15723 593 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 CEP135Q66GS9 1140 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 IGDCC4Q8TDY8 1250 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 NAPBQ9H115 298 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 CLIP2Q9UDT6 1046 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 ZNF215Q9UL58 517 aaPredicted RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 BRWD3Q6RI45 1802 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 ZNF646O15015 1829 aaPredicted RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 FOCADQ5VW36 1801 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 NPHP1O15259 732 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 RANBP6O60518 1105 aaKnown RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 WDHD1O75717 1129 aaPredicted RBP8.49□□□□□ -1.05
NXPE3-203ENST00000477909 STX1AQ16623 288 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 SYNE3Q6ZMZ3 975 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 C3orf67Q6ZVT6 689 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 AOPEPQ8N6M6 819 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 LY9Q9HBG7 655 aa8.49□□□□□ -1.05
NXPE3-203ENST00000477909 ZMYM6O95789 1325 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
NXPE3-203ENST00000477909 RAD51AP2Q09MP3 1159 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 MAP3K12Q12852 859 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 KRT40Q6A162 431 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 BICDL1Q6ZP65 573 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 DHX40Q8IX18 779 aaKnown RBP8.48□□□□□ -1.05
NXPE3-203ENST00000477909 FAM217BQ9NTX9 383 aaPredicted RBP8.48□□□□□ -1.05
NXPE3-203ENST00000477909 SLC4A4Q9Y6R1 1079 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 DDX60LQ5H9U9 1706 aaKnown RBP8.48□□□□□ -1.05
NXPE3-203ENST00000477909 GOLGA8AA7E2F4 631 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 BECN2A8MW95 431 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 IFIT3O14879 490 aaKnown RBP8.48□□□□□ -1.05
NXPE3-203ENST00000477909 ZBTB43O43298 467 aa8.48□□□□□ -1.05
NXPE3-203ENST00000477909 RBM6P78332 1123 aaKnown RBP8.48□□□□□ -1.05
NXPE3-203ENST00000477909 CHRNDQ07001 517 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms