RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
SMARCB1-206ENST00000477836 FAM151AQ8WW52 585 aa12.33□□□□□ -0.44
SMARCB1-206ENST00000477836 FRAT2O75474 233 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 UBE4AQ14139 1066 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 TRIB2Q92519 343 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 MYH16Q9H6N6 1097 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
SMARCB1-206ENST00000477836 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 PTPRAP18433 802 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 FOXO4P98177 505 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 SHHQ15465 462 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 PICK1Q9NRD5 415 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 GJD2Q9UKL4 321 aa12.31□□□□□ -0.44
SMARCB1-206ENST00000477836 TRIM75PA6NK02 468 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 CYP2B6P20813 491 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 GNAI1P63096 354 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 C9orf50Q5SZB4 431 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 MAP3K21Q5TCX8 1036 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 MRIQ9BWK5 157 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
SMARCB1-206ENST00000477836 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 HHIPL2Q6UWX4 724 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 G2E3Q7L622 706 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 STK31Q9BXU1 1019 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 SENP6Q9GZR1 1112 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 MAST3O60307 1309 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 PTPRFP10586 1907 aa12.29□□□□□ -0.44
SMARCB1-206ENST00000477836 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 NFIAQ12857 509 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 LHX8Q68G74 356 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 TSPYL6Q8N831 410 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
SMARCB1-206ENST00000477836 PLXNB2O15031 1838 aa12.27□□□□□ -0.44
SMARCB1-206ENST00000477836 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-206ENST00000477836 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
SMARCB1-206ENST00000477836 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.45
SMARCB1-206ENST00000477836 CDC42EP5Q6NZY7 148 aa12.27□□□□□ -0.45
SMARCB1-206ENST00000477836 LINS1Q8NG48 757 aa12.27□□□□□ -0.45
SMARCB1-206ENST00000477836 LTBP2Q14767 1821 aa12.27□□□□□ -0.45
SMARCB1-206ENST00000477836 REV3LO60673 3130 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 GCLCP48506 637 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 EPHA10Q5JZY3 1008 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 CCDC84Q86UT8 332 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 ADAMTS19Q8TE59 1207 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 PPM1EQ8WY54 764 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 FAM198AQ9UFP1 575 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
SMARCB1-206ENST00000477836 PHIPQ8WWQ0 1821 aa12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 ZKSCAN1P17029 563 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 GRIN2CQ14957 1233 aa12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 UHRF1Q96T88 793 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 ATP11BQ9Y2G3 1177 aa12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 BDP1A6H8Y1 2624 aa12.25□□□□□ -0.45
SMARCB1-206ENST00000477836 SLURP2P0DP57 97 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 XRCC5P13010 732 aaKnown RBP12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 RTP1P59025 263 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 FKBP5Q13451 457 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 DOCK1Q14185 1865 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 DOCK2Q92608 1830 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 BADQ92934 168 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 PRDM5Q9NQX1 630 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 DAGLAQ9Y4D2 1042 aa12.24□□□□□ -0.45
SMARCB1-206ENST00000477836 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
SMARCB1-206ENST00000477836 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
SMARCB1-206ENST00000477836 FLIIQ13045 1269 aa12.23□□□□□ -0.45
SMARCB1-206ENST00000477836 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCB1-206ENST00000477836 DIXDC1Q155Q3 683 aa12.23□□□□□ -0.45
SMARCB1-206ENST00000477836 ZSCAN29Q8IWY8 852 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms