RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 ZNF532Q9HCE3 1301 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 FAM205CA6NFA0 338 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 GUCY1A2P33402 732 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 LINC00301Q8NCQ3 95 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 UBAC1Q9BSL1 405 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 VPS16Q9H269 839 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 SAMSN1Q9NSI8 373 aaKnown RBP11.2□□□□□ -0.62
CMC1-209ENST00000477739 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 KDM3BQ7LBC6 1761 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 ZMYND10O75800 440 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 HLFQ16534 295 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 TSGA10IPQ3SY00 556 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 E4F1Q66K89 784 aaPredicted RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 PPFIBP1Q86W92 1011 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 RCOR1Q9UKL0 485 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 CDC27P30260 824 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 CCZ1BP86790 482 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 CCZ1P86791 482 aaPredicted RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 DNAJC21Q5F1R6 531 aaKnown RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 DIS3L2Q8IYB7 885 aaKnown RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 ZBTB38Q8NAP3 1195 aaPredicted RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 FBXO18Q8NFZ0 1043 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 KCNH3Q9ULD8 1083 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 A0A0U1RQJ8 604 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 SSRP1Q08945 709 aaKnown RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 CYB5R4Q7L1T6 521 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 DZIP3Q86Y13 1208 aaKnown RBP11.19□□□□□ -0.62
CMC1-209ENST00000477739 TBC1D10CQ8IV04 446 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 ATRIPQ8WXE1 791 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 TFR2Q9UP52 801 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 SLC4A4Q9Y6R1 1079 aa11.19□□□□□ -0.62
CMC1-209ENST00000477739 VWA3AA6NCI4 1184 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 CLCN6P51797 869 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
CMC1-209ENST00000477739 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
CMC1-209ENST00000477739 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 APPBP2Q92624 585 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 POLD4Q9HCU8 107 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 ZBTB1Q9Y2K1 713 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 ELP1O95163 1332 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
CMC1-209ENST00000477739 SF3A3Q12874 501 aaKnown RBP eCLIP11.18□□□□□ -0.62
CMC1-209ENST00000477739 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 CIAO1O76071 339 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 MYL5Q02045 173 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 PTPROQ16827 1216 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 ADALQ6DHV7 355 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 SMARCE1Q969G3 411 aa11.18□□□□□ -0.62
CMC1-209ENST00000477739 NUP88Q99567 741 aaPredicted RBP11.18□□□□□ -0.62
CMC1-209ENST00000477739 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
CMC1-209ENST00000477739 WTIPA6NIX2 430 aaPredicted RBP11.17□□□□□ -0.62
CMC1-209ENST00000477739 GSDMDP57764 484 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 ZNF569Q5MCW4 686 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 FMR1NBQ8N0W7 255 aaPredicted RBP11.17□□□□□ -0.62
CMC1-209ENST00000477739 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 SOWAHDA6NJG2 315 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 ZPR1O75312 459 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 BCAMP50895 628 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
CMC1-209ENST00000477739 TOGARAM2Q6ZUX3 1019 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 C10orf67Q8IYJ2 551 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 OXER1Q8TDS5 423 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
CMC1-209ENST00000477739 SUGCTQ9HAC7 445 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 MCM7P33993 719 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 PDE4BQ07343 736 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 NAA16Q6N069 864 aaPredicted RBP11.17□□□□□ -0.62
CMC1-209ENST00000477739 MFSD6Q6ZSS7 791 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 CAGE1Q8TC20 777 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 WDR24Q96S15 920 aa11.17□□□□□ -0.62
CMC1-209ENST00000477739 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
CMC1-209ENST00000477739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.17□□□□□ -0.62
CMC1-209ENST00000477739 CPDO75976 1380 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 ENC1O14682 589 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 MCAMP43121 646 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
CMC1-209ENST00000477739 GUCA1BQ9UMX6 200 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
CMC1-209ENST00000477739 EPSTI1Q96J88 318 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 ALDH8A1Q9H2A2 487 aaPredicted RBP11.16□□□□□ -0.62
CMC1-209ENST00000477739 VPS18Q9P253 973 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 PCDHB6Q9Y5E3 794 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 CTSWP56202 376 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 FAM47AQ5JRC9 791 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 NLRP10Q86W26 655 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 2814.3 ms