RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ATRNO75882 1429 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 NBPF14Q5TI25 921 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 SIL1Q9H173 461 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 CPP00450 1065 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 FOSBP53539 338 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 BEND6Q5SZJ8 279 aaPredicted RBP17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 FBXO41Q8TF61 875 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 SUCLG2Q96I99 432 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 FAM107BQ9H098 131 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 VPS18Q9P253 973 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 BIN1O00499 593 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 ATP1A3P13637 1013 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 PFKFB1P16118 471 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 MYSM1Q5VVJ2 828 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 DHX58Q96C10 678 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 MED4Q9NPJ6 270 aa17.46■□□□□ 0.39
CLSTN1-205ENST00000477264 CORO7P57737 925 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 STOX1Q6ZVD7 989 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 BICC1Q9H694 974 aaKnown RBP17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 JRKLQ9Y4A0 524 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 FAM237AA0A1B0GTK4 181 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 CUTAO60888 179 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 HSP90B2PQ58FF3 399 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 CCDC12Q8WUD4 166 aaPredicted RBP17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 DPF2Q92785 391 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 METTL22Q9BUU2 404 aaPredicted RBP17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 PDE11AQ9HCR9 933 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 CLIC4Q9Y696 253 aa17.45■□□□□ 0.38
CLSTN1-205ENST00000477264 MAP3K15Q6ZN16 1313 aa17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 ARFGEF2Q9Y6D5 1785 aa17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 PDIA3P30101 505 aaKnown RBP17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 SYNE3Q6ZMZ3 975 aa17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 SUGP1Q8IWZ8 645 aaKnown RBP17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 ELOA2Q8IYF1 753 aaPredicted RBP17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 MYCBPQ99417 103 aaPredicted RBP17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 NCAPGQ9BPX3 1015 aa17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 EPC1Q9H2F5 836 aa17.44■□□□□ 0.38
CLSTN1-205ENST00000477264 EIF3CLB5ME19 914 aaKnown RBP17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 SYKP43405 635 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 AXDND1Q5T1B0 1012 aaPredicted RBP17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 ANO1Q5XXA6 986 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 EFCAB13Q8IY85 973 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 EIF3CQ99613 913 aaKnown RBP17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 MYD88Q99836 296 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 LRRC2Q9BYS8 371 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 HELLSQ9NRZ9 838 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 CDC23Q9UJX2 597 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 KCNQ2O43526 872 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 CCDC175P0C221 793 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 HAUS7Q99871 368 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 NAA15Q9BXJ9 866 aaKnown RBP17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
CLSTN1-205ENST00000477264 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 CCT2P78371 535 aaKnown RBP17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 DEF6Q9H4E7 631 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 ANKZF1Q9H8Y5 726 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 PPP6R2O75170 966 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 CYP19A1P11511 503 aaPredicted RBP17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 ATP2B1P20020 1258 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 GYS2P54840 703 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 TC2NQ8N9U0 490 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 DACH1Q9UI36 760 aa17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.42■□□□□ 0.38
CLSTN1-205ENST00000477264 MROH7-TTC4A0A0A0MT08 1334 aa17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 CHRM1P11229 460 aaPredicted RBP17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 PANX2Q96RD6 677 aa17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 HOOK1Q9UJC3 728 aaKnown RBP17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 AFDNP55196 1824 aaKnown RBP17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 TJP1Q07157 1748 aa17.41■□□□□ 0.38
CLSTN1-205ENST00000477264 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 NEURL1BA8MQ27 555 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 TMEM232C9JQI7 657 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 FDPSP14324 419 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms