RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 LIG1P18858 919 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 CD68P34810 354 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 CDK8P49336 464 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 RPL6Q02878 288 aaKnown RBP8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 RSPO4Q2I0M5 234 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 FOXD4L6Q3SYB3 417 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 FOXD4L3Q6VB84 417 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 REC114Q7Z4M0 266 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 MAP4K3Q8IVH8 894 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 PMFBP1Q8TBY8 1022 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 CPLX3Q8WVH0 158 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 KRT82Q9NSB4 513 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 CACNA2D2Q9NY47 1150 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 KCNK4Q9NYG8 393 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 PCDHA4Q9UN74 947 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 MRVI1Q9Y6F6 885 aa8.91□□□□□ -0.98
FNDC3B-208ENST00000476794 ADAM11O75078 769 aa8.9□□□□□ -0.98
FNDC3B-208ENST00000476794 CCDC81Q6ZN84 652 aa8.9□□□□□ -0.98
FNDC3B-208ENST00000476794 SEMA6BQ9H3T3 888 aa8.9□□□□□ -0.98
FNDC3B-208ENST00000476794 STRIP2Q9ULQ0 834 aa8.9□□□□□ -0.98
FNDC3B-208ENST00000476794 PPT2Q9UMR5 302 aa8.9□□□□□ -0.98
FNDC3B-208ENST00000476794 LOC100289279A0A1B0GTE1 492 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 ZNF862O60290 1169 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 SELPP16109 830 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 RBL2Q08999 1139 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 GK5Q6ZS86 529 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 DPH6Q7L8W6 267 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 WDR89Q96FK6 387 aaPredicted RBP8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 SRRTQ9BXP5 876 aaKnown RBP8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 ZNF408Q9H9D4 720 aa8.89□□□□□ -0.99
FNDC3B-208ENST00000476794 SPDYE3A6NKU9 549 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 ETFBP38117 255 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 ZNF165P49910 485 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 INPP5AQ14642 412 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 FBXW10Q5XX13 1052 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 DTWD1Q8N5C7 304 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 FERD3LQ96RJ6 166 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
FNDC3B-208ENST00000476794 A0A0A0MRY4 1105 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 DLGAP3O95886 979 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 CLCQ05315 142 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 WIPI1Q5MNZ9 446 aaPredicted RBP8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 LRFN4Q6PJG9 635 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 FBXO11Q86XK2 927 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 FMR1NBQ8N0W7 255 aaPredicted RBP8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 UBASH3BQ8TF42 649 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 PLPPR2Q96GM1 343 aa8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
FNDC3B-208ENST00000476794 RAC1P63000 192 aa8.86□□□□□ -0.99
FNDC3B-208ENST00000476794 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.992e-7■□□□□ 9.9
FNDC3B-208ENST00000476794 SHDQ96IW2 340 aa8.86□□□□□ -0.99
FNDC3B-208ENST00000476794 PCDHB14Q9Y5E9 798 aa8.86□□□□□ -0.99
FNDC3B-208ENST00000476794 DCDC2CA8MYV0 355 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 GFRA2O00451 464 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 DUOXA2Q1HG44 320 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 KIF4BQ2VIQ3 1234 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 PRRT3Q5FWE3 981 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 HP1BP3Q5SSJ5 553 aaPredicted RBP8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 CKAP2LQ8IYA6 745 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 REXO1Q8N1G1 1221 aaKnown RBP8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 ELMO3Q96BJ8 720 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 RAD18Q9NS91 495 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 SNCAIPQ9Y6H5 919 aa8.85□□□□□ -0.99
FNDC3B-208ENST00000476794 FAM229AH3BQW9 127 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 DLL1O00548 723 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 AOC2O75106 756 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 EIF6P56537 245 aaKnown RBP8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 HDXQ7Z353 690 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 CRBNQ96SW2 442 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 CSADQ9Y600 493 aa8.84□□□□□ -0.99
FNDC3B-208ENST00000476794 WISP1O95388 367 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 SLFN14P0C7P3 912 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 CCDC144BQ3MJ40 725 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
FNDC3B-208ENST00000476794 ANKS3Q6ZW76 656 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 C12orf40Q86WS4 652 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 ZNRF3Q9ULT6 936 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 CORINQ9Y5Q5 1042 aa8.83□□□□□ -1
FNDC3B-208ENST00000476794 GIPRP48546 466 aa8.82□□□□□ -1
FNDC3B-208ENST00000476794 TRIM28Q13263 835 aaKnown RBP8.82□□□□□ -1
FNDC3B-208ENST00000476794 RUSC1Q9BVN2 902 aa8.82□□□□□ -1
FNDC3B-208ENST00000476794 EHMT1Q9H9B1 1298 aa8.82□□□□□ -1
FNDC3B-208ENST00000476794 PCDHGC5Q9Y5F6 944 aa8.82□□□□□ -1
FNDC3B-208ENST00000476794 PRAMEF27A3QJZ7 478 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 SMAD7O15105 426 aaKnown RBP8.81□□□□□ -1
FNDC3B-208ENST00000476794 DYRK3O43781 588 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 APBA3O96018 575 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 IMPDH2P12268 514 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 ZC3H12AQ5D1E8 599 aaKnown RBP8.81□□□□□ -1
FNDC3B-208ENST00000476794 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 ZMYM1Q5SVZ6 1142 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 ACAD11Q709F0 780 aa8.81□□□□□ -1
FNDC3B-208ENST00000476794 CYFIP1Q7L576 1253 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms