RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 MAST2Q6P0Q8 1798 aa16.49■□□□□ 0.23
HMGCS2-203ENST00000476640 CENPFP49454 3210 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 BCAR3O75815 825 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 HOXD10P28358 340 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 BTDP43251 543 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 MECOMQ03112 1051 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 RFX7Q2KHR2 1363 aa16.48■□□□□ 0.23
HMGCS2-203ENST00000476640 GPR75-ASB3A0A0A6YYF3 556 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 CAP1Q01518 475 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 PICALMQ13492 652 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 SLC4A8Q2Y0W8 1093 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 C17orf99Q6UX52 265 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 ZFPM1Q8IX07 1006 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 ATRNL1Q5VV63 1379 aa16.47■□□□□ 0.23
HMGCS2-203ENST00000476640 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
HMGCS2-203ENST00000476640 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
HMGCS2-203ENST00000476640 RAI14Q9P0K7 980 aa16.46■□□□□ 0.23
HMGCS2-203ENST00000476640 CPA4Q9UI42 421 aa16.46■□□□□ 0.23
HMGCS2-203ENST00000476640 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
HMGCS2-203ENST00000476640 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.22
HMGCS2-203ENST00000476640 FOCADQ5VW36 1801 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 PTPRAP18433 802 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 PSMC4P43686 418 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 SLC45A1Q9Y2W3 748 aa16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 COL2A1P02458 1487 aaPredicted RBP16.45■□□□□ 0.22
HMGCS2-203ENST00000476640 MYO5AQ9Y4I1 1855 aaKnown RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 A0A0G2JLL6 359 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 PNMA6EA0A0J9YXQ4 647 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 DDTLA6NHG4 134 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 TBC1D12O60347 775 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 EN2P19622 333 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 MOGSQ13724 837 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 SH3BP5LQ7L8J4 393 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 PRRT2Q7Z6L0 340 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 ADGRA2Q96PE1 1338 aa16.44■□□□□ 0.22
HMGCS2-203ENST00000476640 IGSF3O75054 1194 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 RHBDL3P58872 404 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 GADL1Q6ZQY3 521 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 TMEM57Q8N5G2 664 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 RAET1EQ8TD07 263 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 AFG3L2Q9Y4W6 797 aa16.43■□□□□ 0.22
HMGCS2-203ENST00000476640 BAG3O95817 575 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 PLCG2P16885 1265 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 MCAMP43121 646 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 FCGRTP55899 365 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 POLA2Q14181 598 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 PI16Q6UXB8 463 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 TNNQ9UQP3 1299 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 MYPNQ86TC9 1320 aa16.42■□□□□ 0.22
HMGCS2-203ENST00000476640 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 OSBPP22059 807 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 TEX11Q8IYF3 940 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 SMCR8Q8TEV9 937 aaPredicted RBP16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 CEP290O15078 2479 aa16.41■□□□□ 0.22
HMGCS2-203ENST00000476640 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 CYP2C8P10632 490 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 BCRP11274 1271 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 GRK4P32298 578 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 NKX2-3Q8TAU0 364 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 ZNF384Q8TF68 577 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms