RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 CDK5RAP2Q96SN8 1893 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 APBB1O00213 710 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 CAP1Q01518 475 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 PICALMQ13492 652 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 CSADQ9Y600 493 aa17.31■□□□□ 0.36
SLC6A8-209ENST00000476466 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 GPR25O00155 361 aa17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 ENTPD3O75355 529 aa17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 ZNF341Q9BYN7 854 aa17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 LRP2BPQ9P2M1 347 aa17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.3■□□□□ 0.36
SLC6A8-209ENST00000476466 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 IRF6O14896 467 aa17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 CRHR2Q13324 411 aa17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 DCAF15Q66K64 600 aa17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 FAM43AQ8N2R8 423 aa17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 SH3RF3Q8TEJ3 882 aaPredicted RBP17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
SLC6A8-209ENST00000476466 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 CCL15Q16663 113 aa17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 ERO1BQ86YB8 467 aa17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 SLF2Q8IX21 1173 aa17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 AATFQ9NY61 560 aaKnown RBP eCLIP17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 TNRC18O15417 2968 aaPredicted RBP17.28■□□□□ 0.36
SLC6A8-209ENST00000476466 INHBEP58166 350 aa17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 GSTO1P78417 241 aa17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 PPIL2Q13356 520 aa17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 NOM1Q5C9Z4 860 aaKnown RBP17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 NOL9Q5SY16 702 aaKnown RBP17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 KIF1BPQ96EK5 621 aa17.27■□□□□ 0.36
SLC6A8-209ENST00000476466 PHIPQ8WWQ0 1821 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 COL2A1P02458 1487 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 MOGSQ13724 837 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 CTU1Q7Z7A3 348 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 CCDC84Q86UT8 332 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 TEX11Q8IYF3 940 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 EDC3Q96F86 508 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 DOCK1Q14185 1865 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 ZSWIM8A7E2V4 1837 aa17.26■□□□□ 0.35
SLC6A8-209ENST00000476466 BTBD19C9JJ37 291 aa17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 HMMRO75330 724 aa17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 IDH1O75874 414 aaKnown RBP17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 LDHCP07864 332 aa17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 GTF2A2P52657 109 aa17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
SLC6A8-209ENST00000476466 SMARCA5O60264 1052 aaPredicted RBP17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 FKTNO75072 461 aa17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 PPP4CP60510 307 aa17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 MIGA1Q8NAN2 632 aa17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 KCNH4Q9UQ05 1017 aa17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
SLC6A8-209ENST00000476466 FLT1P17948 1338 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 PTPRFP10586 1907 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 CCDC85CA6NKD9 419 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 CHGBP05060 677 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 CYP7A1P22680 504 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 PPATQ06203 517 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 SHROOM1Q2M3G4 852 aaPredicted RBP17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 MAPKAPK5Q8IW41 473 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 TGFBRAP1Q8WUH2 860 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 DNAJC18Q9H819 358 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
SLC6A8-209ENST00000476466 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
SLC6A8-209ENST00000476466 SNAPC2Q13487 334 aa17.22■□□□□ 0.35
SLC6A8-209ENST00000476466 SLFNL1Q499Z3 407 aa17.22■□□□□ 0.35
SLC6A8-209ENST00000476466 SCYL3Q8IZE3 742 aa17.22■□□□□ 0.35
SLC6A8-209ENST00000476466 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
SLC6A8-209ENST00000476466 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 MAP4K4O95819 1239 aaPredicted RBP17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 CETPP11597 493 aa17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 PTPRAP18433 802 aa17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 JAG1P78504 1218 aa17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 TAF1CQ15572 869 aaPredicted RBP17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 CD99L2Q8TCZ2 262 aa17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
SLC6A8-209ENST00000476466 GOLIM4O00461 696 aa17.2■□□□□ 0.34
SLC6A8-209ENST00000476466 TBC1D12O60347 775 aa17.2■□□□□ 0.34
SLC6A8-209ENST00000476466 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
SLC6A8-209ENST00000476466 EVX2Q03828 476 aa17.2■□□□□ 0.34
SLC6A8-209ENST00000476466 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms